Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4413 ATGGCATCCATCATCAGAAAAATAGTCGGCTACAATTATAATAATAATAATAATTCCGTATCTCCGTTTCTTCTCACTTTCCGCAGAGCTGTTTCTTTCAAGCTTTTCGTTGGAGGACTCTCCTTTCACACGACAGAGAAAACATTGTCAGATGCATTTTCAAATTATGGACAAGTTGTTGAAGCTAAAGTTATAATGGATAGGATTTCAGAGAAATCTAAAGGGTATGGTTTTGTTACTTTTGCTTCACAAGACGAAGCTGAGAATGCCATAGCAGAGATGAATGAAAAGGCACTAAACGGACGTGTTATCTTTGTTGATTATGCAAAACCGGATACTAAAAAAAGTACGGGAATGCCAATTGCCAGAGGTCCTCCTGAAGATCTGAACAAACAACGGACAGTGGATTCTCCTCAAGACACTTGA 426 0.385 MASIIRKIVGYNYNNNNNSVSPFLLTFRRAVSFKLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVIMDRISEKSKGYGFVTFASQDEAENAIAEMNEKALNGRVIFVDYAKPDTKKSTGMPIARGPPEDLNKQRTVDSPQDT* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4413 141 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 1 128 - -
Mal3g4413 141 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 104 IPR000504 GO:0003723
Mal3g4413 141 Gene3D - 25 137 IPR012677 -
Mal3g4413 141 SMART rrm1_1 34 107 IPR000504 GO:0003723
Mal3g4413 141 SUPERFAMILY RNA-binding domain, RBD 32 124 IPR035979 GO:0003676
Mal3g4413 141 PANTHER TRANSFORMER-2-RELATED 1 128 - -
Mal3g4413 141 MobiDBLite consensus disorder prediction 112 141 - -
Mal3g4413 141 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4413 Mal-Chr3 123682790 123684068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4413 35 125 Eukaryotic Initiation Factors Gene Family AT1G49760 33.981 5.81e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4413 - - lja:Lj1g3v4721740.1 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4413 3 123682790 123684068 Mal3g4413 3 123682790 123684068 ECH