Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4407 ATGGACATTAATATGCCACCAGGTTATCGTTTCTACCCTACAGAAGAAGAGCTTATTTCGTTCTATCTTCACAATATGCTTGAAGGAGAGAATGAATACGCCATTCGTACTGTTATACCAGTCGTTAATATATACGATTACAATCCATCACAACTCCCACAATTTTCAGGAGAGGCTAGTATGAGAGACATGGAGCAATGGTTCTTTTTGGTACCAAGGCAAGAAAGTGAAGTGAGAGGAGGGAGACCAAAACGTCTCACAACAACTGGGTACTGGAAAGCCACAGGATCTCCTAATCATGTTTATTCTTCGGATAATCGCATCGTCGGAATGAAAAGGACTATGGTTTTCTATAGTGGAAGAGCTCCAAATGGAAAGAAAACTGATTGGAAAATGAACGAGTATAAGGCCATCCAATTAGATGAAGCATCCTCTTCAAACCAAGTAGCTCCTAAGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAATCAAAGTGCTTAAGGGCATTTGATAGACGACCACCACCAAGGAGGGTTACAACACATGTTCAAAATGCTCAAGAGCCCAAGAAAGATTCAACTTGCGAACATGATAATAAAATCTCAATGGAGATAAGTGCAACAAACTCATCAGAGAGCTCTTCCTCAATAGACCATGGCCAACCCTCACAAGAGGTTGGAGAAGCTAGCCAGATGGATATTAATGTTGACTATGATGATGCTTTGTTGGATTGGGAGCAAGTTGATTGGTTCTTAGGATCGGAGCCATGA 777 0.4106 MDINMPPGYRFYPTEEELISFYLHNMLEGENEYAIRTVIPVVNIYDYNPSQLPQFSGEASMRDMEQWFFLVPRQESEVRGGRPKRLTTTGYWKATGSPNHVYSSDNRIVGMKRTMVFYSGRAPNGKKTDWKMNEYKAIQLDEASSSNQVAPKLRQEFSLCRVYKKSKCLRAFDRRPPPRRVTTHVQNAQEPKKDSTCEHDNKISMEISATNSSESSSSIDHGQPSQEVGEASQMDINVDYDDALLDWEQVDWFLGSEP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4407 258 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 252 - -
Mal3g4407 258 SUPERFAMILY NAC domain 3 165 IPR036093 GO:0003677|GO:0006355
Mal3g4407 258 Gene3D NAC domain 14 169 IPR036093 GO:0003677|GO:0006355
Mal3g4407 258 MobiDBLite consensus disorder prediction 202 232 - -
Mal3g4407 258 Pfam No apical meristem (NAM) protein 6 136 IPR003441 GO:0003677|GO:0006355
Mal3g4407 258 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 252 - -
Mal3g4407 258 MobiDBLite consensus disorder prediction 174 235 - -
Mal3g4407 258 ProSiteProfiles NAC domain profile. 5 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4407 Mal-Chr3 123636459 123637671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4407 8 252 NAC Transcription Factor Family AT5G22380 45.382 8.25e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g4407 NAM 7.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4407 - - gmx:100777948 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4407 3 123636459 123637671 Mal3g4407 3 123636459 123637671 ECH