Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4363 ATGGCGGAAGAACACCGATGTGAAACTCCAGAAGGTCACAGACTCTGTGCAAACAACTGCGGCTTCTTCGGCAGTTCAGCTACGATGAATCTCTGTTCAAAATGTTACAGAGACATCCATTTGAAGGAGCAAGAACAAGCCAAAACCAAATCAACAATCGAAACCGCTCTCTCCTCCGCATCTGCTGCCACCGCCGTTGTCGTCGCAGCTTCTCCGGTTGTGGAAATCGAATCTCTCCCTCAAACTCCGGCGTTGACCGTACCGTCGATCGTGCCTGAAGCATCGGACAATTCACCAGGACCGGTTCAATCGAACCGGTGCGGGACGTGTAGAAAGCGGACCGGGTTAACCGGGTTCAAGTGTAGATGTGGAATCACGTTTTGTGGGACCCACAGGTATCCGGAGAAACACGAATGCGGTTTTGATTTCAAAGCGGTGGGGAGAGACGAGATAGCGAAAGCGAATCCCGTGATCAAAGCTGATAAGCTCAGAAGAATTTGA 501 0.509 MAEEHRCETPEGHRLCANNCGFFGSSATMNLCSKCYRDIHLKEQEQAKTKSTIETALSSASAATAVVVAASPVVEIESLPQTPALTVPSIVPEASDNSPGPVQSNRCGTCRKRTGLTGFKCRCGITFCGTHRYPEKHECGFDFKAVGRDEIAKANPVIKADKLRRI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4363 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Mal3g4363 166 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Mal3g4363 166 Gene3D - 1 63 - -
Mal3g4363 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 166 - -
Mal3g4363 166 Gene3D - 86 162 IPR035896 -
Mal3g4363 166 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 166 - -
Mal3g4363 166 SUPERFAMILY AN1-like Zinc finger 94 161 IPR035896 -
Mal3g4363 166 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Mal3g4363 166 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Mal3g4363 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Mal3g4363 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Mal3g4363 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4363 Mal-Chr3 123185610 123186110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4363 1 166 C2H2 Transcription Factor Family AT3G52800 50.568 8.75e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4363 - - gmx:100789686 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4363 3 123185610 123186110 Mal3g4363 3 123185610 123186110 ECH
Mal3g4363 3 123185610 123186110 Mal1g3264 1 52771273 52771752 PCT