Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4355 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGTAAGAGAAGACCGAAGTGTAGGGAGAGGCGCTATAGGGATTTGCCAGTCCAATTCTCAGAACAAAACGTCTGAGAAAAAAAATAAGAAGCCTTTGGCACTGAACTTGGGATATAAGGATAATATTGATGATGATATTAACAAGTTGTTTGAATCAATTGGTCTTAAATCTGCATCAAGGGATTTGGGTATTTCTCAAGATGGTACGAGTCATAAACTGAAAAACACATTAAAAAAGCCGATGGCAATGGGTGTTCCTCGGTCCCCACGATTTGGACCTTCCGAGGCTGTTAATTTGAAGCAGGCATTAAGAGACCTTTGTATATCCAAGGCATCAGAAGTGGCTGCCATGAAACGGTTATCAAAGTCAACAGCTTCTCCAAGAATATCGGAGGTTGGTAGGATACAGACATTGTACAGTTCAGTTGTAGATGAAGCTAGTCATTCAGGGCCTCATGCTGCTGAGAGTAAAGGGCGTAGAATGGAAATATCTCTAGTGCCAGAAAAAAGCAAGCCACAATCGTTGAATAAAACATCTCAATCTCATCAAACTACCCAAATCACATCATCGAGCCAAGCCATTAATTCTGCCTGGGAAATCGCTGTTGCAACTATTCAACTTGATTCCGGGACTTCATCGTCGCAAAGTGATTCAGCATGTTCATCAAGTATAGTTGGGTTTCAATCACAGCGTGTGATACCTTGTCAACCAGAAAAGCAAACACCTGCATCTTCTCCATCACTTTGTAATACATCTGAAAGCAAATCAGAGTTGCCTGTAAATGCTTCTTCCCCTAAAAAGTTAGGAAATAAAGTGGTTGTATCAAATTCTGGACGGAAAGGTAGGTTGCAGACAGCCTCTTCTTCATCTACTTCTGTTAATAGCAGCAGAGTTAACAAACAGGCACATCATTCCCCTCACACAATTAAAATGGTCATTAAGAACAAGAATTTGAGTAAGAAGAAAGCGAAGGAGGATTCATGTTCTGCATTATGTGATCCTACATCAAATGAAGTTAGTAAGTCTGTTCCTGGCACAACTCAGCTGGTTTGTGAAAGATGTAGGTGTGCTTTAGAAAATACAAGGGAAGAAAAAAAACAAGAGGTAATGGCCTTGGACTCTACTAGTCCTGGAAATGGAGTGAACTCGAGTAATGCGCACTCTGGTTCAAATAAGCCTTATTCGGCATCAAATAGTGGTAGTATAAGCAAATCAGTTGCAAAGGTGGAGAAGGTTCAGAAGAACACCAAGTTGAAAGAGCAACTCGAGTTTTCACAAAGCTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACTAGTACCAGTGATGAGAGCAACATGAGTGGCTCAAGTTGCAGCAGTAGGCCTCACATGTCGAAGGATGTTCGGTGGGAAGCCATTCGACATGCTCAAATGCAGCACGGAGTCTTGGGTTTGAGACATTTTAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTTATTGGCACAAGTTGTTTGTTTGCGATTAAGGTCATGGACATCGAATTTTTAGCAAGAAGGAAAAAGATGCCCAGGGCTCAAACTGAAAGAGAAATATTAAGGATGCTGGACCATCCGTTTCTCCCCACATTGTATGTGCAATTTACATCAGATAATCTCTCATGTTTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGTCAGAAGCAGCTTGGTAGATGTTTTTCAGAGCTAGCAGCAAGGTTTTATGTTGCTGAAGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACTGATTTTGATCTGTCGTTGAGGTGTGCTGTTAGCCCAACACTTCTGAAGTCATCTTCTGATATTGACCCTGCAAAAGTTTCTGGTCTTAGTGCACAATCAAGTTGCATTGAACCATTCTGCATTCAACCATCTTGTCAAGTTTCATGCTTCAGCCCCAGATTCCTACCTGCTGCTGCTAAAGCAAGAAGATTAAAAGTCGACCCTGTTGCCCAGATCAGATCACTGCCGCAGCTTGTGGCCGAGCCCACTGATGCAAGATCAAACTCATTTGTTGGTACACACGAATACTTGGCGCCTGAGATCATCAAAGAAGAGGGACACGGTGCTGCCGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTTTAACAACGAAGAAACATTAGCAAACGTGGTGTTGCAAAGTCTTGAATTCCCTGATGACCCATTTGTCAGTTTTGAAGCTAGGGATCTGATTAGAGGGTTGTTAGTTAAAGAGCCTGAAAACCGTTTGGGTTCACAGAAAGGAGCTGCTGAGATTAAACGACATCCCTTCTTCGAGGGTCTTAACTGGGCCCTAATTCGTTGCGCTATCCCACCAGAACTTCCAGAGTTTTGTGATTTTGGAGTTTTAGACATGGCATCACAAGGCAAAGGTGCTAAGTATTTAGAGTGTAATGTAGGACAACACGTGGAATTCGAGTTGTTTTAA 2631 0.4204 MGSFSGTCEIVEVREDRSVGRGAIGICQSNSQNKTSEKKNKKPLALNLGYKDNIDDDINKLFESIGLKSASRDLGISQDGTSHKLKNTLKKPMAMGVPRSPRFGPSEAVNLKQALRDLCISKASEVAAMKRLSKSTASPRISEVGRIQTLYSSVVDEASHSGPHAAESKGRRMEISLVPEKSKPQSLNKTSQSHQTTQITSSSQAINSAWEIAVATIQLDSGTSSSQSDSACSSSIVGFQSQRVIPCQPEKQTPASSPSLCNTSESKSELPVNASSPKKLGNKVVVSNSGRKGRLQTASSSSTSVNSSRVNKQAHHSPHTIKMVIKNKNLSKKKAKEDSCSALCDPTSNEVSKSVPGTTQLVCERCRCALENTREEKKQEVMALDSTSPGNGVNSSNAHSGSNKPYSASNSGSISKSVAKVEKVQKNTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNMSGSSCSSRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDIEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSELAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSDIDPAKVSGLSAQSSCIEPFCIQPSCQVSCFSPRFLPAAAKARRLKVDPVAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGFNNEETLANVVLQSLEFPDDPFVSFEARDLIRGLLVKEPENRLGSQKGAAEIKRHPFFEGLNWALIRCAIPPELPEFCDFGVLDMASQGKGAKYLECNVGQHVEFELF* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4355 876 ProSiteProfiles Protein kinase domain profile. 494 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4355 876 MobiDBLite consensus disorder prediction 249 314 - -
Mal3g4355 876 Gene3D Phosphorylase Kinase; domain 1 493 577 - -
Mal3g4355 876 PANTHER FLIPPASE KINASE 1-RELATED 1 876 - -
Mal3g4355 876 MobiDBLite consensus disorder prediction 181 202 - -
Mal3g4355 876 CDD STKc_phototropin_like 492 844 - -
Mal3g4355 876 MobiDBLite consensus disorder prediction 430 469 - -
Mal3g4355 876 SMART serkin_6 494 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4355 876 MobiDBLite consensus disorder prediction 384 414 - -
Mal3g4355 876 MobiDBLite consensus disorder prediction 180 202 - -
Mal3g4355 876 MobiDBLite consensus disorder prediction 374 414 - -
Mal3g4355 876 MobiDBLite consensus disorder prediction 431 469 - -
Mal3g4355 876 SUPERFAMILY Protein kinase-like (PK-like) 466 843 IPR011009 -
Mal3g4355 876 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 876 - -
Mal3g4355 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Mal3g4355 876 Pfam Protein kinase domain 495 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4355 876 Pfam Protein kinase domain 723 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4355 876 Gene3D Transferase(Phosphotransferase) domain 1 578 643 - -
Mal3g4355 876 Gene3D Transferase(Phosphotransferase) domain 1 719 840 - -
Mal3g4355 876 MobiDBLite consensus disorder prediction 249 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4355 Mal-Chr3 123099993 123103486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4355 1 876 AGC Kinase Gene Family AT3G52890 52.124 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal3g4355 Pkinase 6.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4355 - K08286 mtr:MTR_7g104180 1485.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4355 3 123099993 123103486 Mal1g3248 1 52171582 52175826 ECH
Mal3g4355 3 123099993 123103486 Mal3g4355 3 123099993 123103486 ECH
Mal3g4355 3 123099993 123103486 Mal1g3248 1 52171582 52175826 PCT