Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4345 ATGGACTTTCATATGAAACAATGGAGAAACCAGCAGCATGAGTCAGAGGAACAACATTCCACAAAGATGCCAAAACTTCTTCTTCACCCTGCACCACCAGAATCCCATCATCACCAACAAGCACTTCCTTTGTTTGTACCTCAACCCAATACCACCAAAGTCACCAACTTGTCAGATTCACCATTACCTTCCAACAACAGATTTCCCAGAATGGGAAGCCATTTTAGCTTATCTCAGTGGCAAGAACTTGAGTTACAGGCTTTGATATTCAGATACATGTTGGTTGGTGCTTCTGTTCCTCCTGAACTTCTTCAACCTATCAAGAAAAGTCAAAGTCTTCTTCATTCATCTCCTTTTTTTCTTCATCACCACCCTCTTCAACATTATCAACCTACATCTTTGTTGCAAACAGGGTATTGGGGAAGAGGAGCAATGGATCCAGAGCCAGGTCGTTGCCGGAGAACCGACGGTAAAAAGTGGCGGTGTTCGAGGGATGTGGTGGCTGGACAAAAGTACTGTGAAAGACACATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTTCCCACACCAATTAGTAGTTGTAATAATGGTGGTGGTGGTGGTGGATCTTTCTCTGCTTTGTCTTCTATTTCTTCTTCACAGCCTCCTCTTGTTACTTCCTCATTGAAATCTCCTTTTGATCTTCACTTCAATCAACGCTCCTCCTCTGGGACCAAAACTGAAGAGGAGAGGTTATTTGAAAGCGAAGATCATGTGGGTGGGGATGGAAGATCAGGTGGGCAAATGCTAAGGCATTTCTTTGACGATTGGCCACGATCACTGCAAGAGTCTGACAATGCTGAAAACAATGATGTGTCATTGAAATTGTCTACTGGCTATGGAGAAGAGCCATGCCCAAGAAATGAGAATGTGGGCCTAGAAACTGAGCAGCAGCAGCAGCAACAACAACTTCAATTGAATTGGGTTGGAGGATGGAATTCAGGTAATCAAGTGGCTTCAATGGGAGGACCACTTGCTGAGGCACTTAGATCATCTACTTCAACTTCTTCACCTACTAGTGTTTTACATCAATTGCCACGTTGTTCTGGTTCTGAGACCAGCTACATTAGCACCTAG 1125 0.4418 MDFHMKQWRNQQHESEEQHSTKMPKLLLHPAPPESHHHQQALPLFVPQPNTTKVTNLSDSPLPSNNRFPRMGSHFSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSQSLLHSSPFFLHHHPLQHYQPTSLLQTGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPISSCNNGGGGGGSFSALSSISSSQPPLVTSSLKSPFDLHFNQRSSSGTKTEEERLFESEDHVGGDGRSGGQMLRHFFDDWPRSLQESDNAENNDVSLKLSTGYGEEPCPRNENVGLETEQQQQQQQLQLNWVGGWNSGNQVASMGGPLAEALRSSTSTSSPTSVLHQLPRCSGSETSYIST* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4345 374 ProSiteProfiles WRC domain profile. 146 190 IPR014977 -
Mal3g4345 374 PANTHER GROWTH-REGULATING FACTOR 3 9 374 - -
Mal3g4345 374 Pfam WRC 147 189 IPR014977 -
Mal3g4345 374 SMART QLQ_2 73 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal3g4345 374 Pfam QLQ 74 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal3g4345 374 MobiDBLite consensus disorder prediction 343 374 - -
Mal3g4345 374 MobiDBLite consensus disorder prediction 1 21 - -
Mal3g4345 374 PANTHER - 9 374 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mal3g4345 374 MobiDBLite consensus disorder prediction 232 263 - -
Mal3g4345 374 MobiDBLite consensus disorder prediction 239 257 - -
Mal3g4345 374 MobiDBLite consensus disorder prediction 342 374 - -
Mal3g4345 374 MobiDBLite consensus disorder prediction 291 314 - -
Mal3g4345 374 ProSiteProfiles QLQ domain profile. 74 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4345 Mal-Chr3 122967536 122970784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4345 1 361 GRF Transcription Factor Family AT3G52910 45.939 5.59e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mal3g4345 WRC 2.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4345 - - gmx:100816436 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4345 3 122967536 122970784 Mal3g4345 3 122967536 122970784 ECH