Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4342 ATGATGGCTCAAAAATACTTACACGAGCTACTTAAGGAAGATCAAGAGCCATTCTTTCTCAACAACTACATTTCTGATAAACGTAGTCAAATGAAAATCACCACTTTACAACTCAAGAAAAAACCATTCAATCAAATTCATAACACAAACTCAAAATCAAAATCAAACTTCAACATGAATCTATGTAAAAACACTTCTTGTTTTTTCTCATTTCCTGAAACACCAGACTTCAAAAAATCACCACTGTTTGAACTAACTTCCCCTGTTAAAAGTCCCTGCAGAATCCCTTCTCGAACAGCAACACTTCTTCTTGAAGCTGCTCTCAGGATCCAGAAACATTCATCATCTTCTTCTTCAAGTTCCAAAATCAAAACAAAAACCAAAGGTTTTGGGCTATTTGGGTCATTCTTCAAGAAACTAACGCAAAGAAACCAGAACCGTAAGCGTGAAACAGAGAATGAGTATTTATCTGTGAGGGAGATATTGAAATTGGAATCTTCTGCGAAGCCTAGAGAAAAAATGGATTCTCAGAAGAAAAACAACTTGGAAATGGAAACTTCAAGTAGTGGTTATTCTTTTGTTACTGATCATGAAGCTTGTGCTTGTTACCAACGTGCTTTTCCTGAAAGTCCTTTTCATTTTGTTCTTCAAACAAGTCCTTGCTCCGGCAGCCACACGCCGGAGTTAGCGTCGCCGAGTCGAAACATAACAGAGGACAAAGAAAGTAATGGTCCAGCTGAGAGTCTCAATCAATTCAAGTCAGGGGAAGAAGAGGAGGAAGATAAGGAACAATGCAGTCCAGTCTGTGTTTTAGACCCACCATTCGAGGACGATGAGGAAGAACATATAAACGATGATGAAGATGGTGTTGATTTTGATTTAGAGAGCAGCTATGCTATTGTTCAGAGAGCAAGGAAGCAGATATTGTACAAGCTTCACAGATTTGAGAAACTCGCAGAATTGGATCCATTAGAACTTGAGAAAAGAATGCTGGATCAAAAAGAGGATGAGGATGAAACATATATGGAAGAGGATGATGATGAAGATGAGGAAATGGAAGTATCATGTGATAAAAGTGACTTCAAAGAATTGGTTTTTGAAGCTGTTTATCTGTCAATGGTCCATGGCAGACAGCAAATCCCACAAGAGTTTAAGAAACTGATTTCCGATCTAATTGTGGAAGAAGAGAGAGAACTTAATTCTTTAGAAGACAGGGACATGGTGGTAGCTAGGATATTGAAGAGGTTGGAATCATGGAAAGAAGTGGAGTCAAACACAATTGATATGATGATAGAAGAGGATTTCTCTTTAGAGGATGGAGGGTGGAAGAAAAATGTTGAGCAGACAAGGAATATGGCTGGGGAGCTTGAGTATGCTATCTTTAGCATTCTGGTGGAGGAATTTTCAGAGGAATTAGTATGTTAA 1425 0.3839 MMAQKYLHELLKEDQEPFFLNNYISDKRSQMKITTLQLKKKPFNQIHNTNSKSKSNFNMNLCKNTSCFFSFPETPDFKKSPLFELTSPVKSPCRIPSRTATLLLEAALRIQKHSSSSSSSSKIKTKTKGFGLFGSFFKKLTQRNQNRKRETENEYLSVREILKLESSAKPREKMDSQKKNNLEMETSSSGYSFVTDHEACACYQRAFPESPFHFVLQTSPCSGSHTPELASPSRNITEDKESNGPAESLNQFKSGEEEEEDKEQCSPVCVLDPPFEDDEEEHINDDEDGVDFDLESSYAIVQRARKQILYKLHRFEKLAELDPLELEKRMLDQKEDEDETYMEEDDDEDEEMEVSCDKSDFKELVFEAVYLSMVHGRQQIPQEFKKLISDLIVEEERELNSLEDRDMVVARILKRLESWKEVESNTIDMMIEEDFSLEDGGWKKNVEQTRNMAGELEYAIFSILVEEFSEELVC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4342 474 MobiDBLite consensus disorder prediction 337 354 - -
Mal3g4342 474 MobiDBLite consensus disorder prediction 334 354 - -
Mal3g4342 474 Coils Coil 385 405 - -
Mal3g4342 474 MobiDBLite consensus disorder prediction 167 186 - -
Mal3g4342 474 PANTHER OS04G0572500 PROTEIN 1 474 - -
Mal3g4342 474 MobiDBLite consensus disorder prediction 252 266 - -
Mal3g4342 474 MobiDBLite consensus disorder prediction 221 271 - -
Mal3g4342 474 MobiDBLite consensus disorder prediction 221 250 - -
Mal3g4342 474 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4342 Mal-Chr3 122869587 122872696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4342 1 276 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 37.901 1.38e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4342 - - cam:101499859 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4342 3 122869587 122872696 Mal3g4342 3 122869587 122872696 ECH
Mal3g4342 3 122869587 122872696 Mal1g3244 1 52103793 52108573 PCT