Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4337 ATGCCAGAAAACAACAATACTACTTATGCATCATCATCATCATCATCAAGCAAAGTTTCGACTGGGCGTCACCCGGTGTACCGAGGAGTGAGGCGTAGGAATAACGGAAAATGGGTATCTGAAATTCGCGAACCGAAAAAACCTAACAGAATTTGGTTAGGGACATTTCCAACACCTGAAATGGCAGCTATAGCATATGATGTAGCTGCTCTTGCTCTTAAGGGTAAAAATGCTGAGTTGAATTTCCCTAATTCTTCTTCTTCTTTTCCTGTTCCTGCTTCTTCATCTCCTCGCGATATTCAAATGGCTGCAGCTAGTGCTGCAGCTGCTGTAGGTGCAGCCAATGATGCACTCATCAGTAATATTAATGAGGGAAATAACCATAATGTTTCAGTGGAACCACAAGAGTTTTTCTCAGGTGGCAATGAGAACAATTATAATGTTAATGAGTTTGTTGATGAGGATTTGATATTTGATATGCCTAATGTTTTGGTTAATATGGCTGAAGGAATGCTACTTAGTCCTCCTCGTTTTGACTTTGTCAGTAATGACTATGAGGATGCACCAGAAAACATTTCATGTGATGATCAAAACCTTTGGAGTTATCCTTATTTCCCATAA 621 0.3977 MPENNNTTYASSSSSSSKVSTGRHPVYRGVRRRNNGKWVSEIREPKKPNRIWLGTFPTPEMAAIAYDVAALALKGKNAELNFPNSSSSFPVPASSSPRDIQMAAASAAAAVGAANDALISNINEGNNHNVSVEPQEFFSGGNENNYNVNEFVDEDLIFDMPNVLVNMAEGMLLSPPRFDFVSNDYEDAPENISCDDQNLWSYPYFP* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4337 206 Gene3D AP2/ERF domain 26 84 IPR036955 GO:0003700|GO:0006355
Mal3g4337 206 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Mal3g4337 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 203 - -
Mal3g4337 206 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Mal3g4337 206 PRINTS Ethylene responsive element binding protein signature 65 85 IPR001471 GO:0003700|GO:0006355
Mal3g4337 206 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Mal3g4337 206 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Mal3g4337 206 MobiDBLite consensus disorder prediction 1 32 - -
Mal3g4337 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 6 203 - -
Mal3g4337 206 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g4337 206 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
Mal3g4337 206 Pfam AP2 domain 25 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4337 Mal-Chr3 122847644 122848264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4337 16 203 AP2-EREBP Transcription Factor Family AT2G36450 60.847 2.68e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal3g4337 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4337 - - gmx:100799620 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4337 3 122847644 122848264 Mal3g4337 3 122847644 122848264 ECH
Mal3g4337 3 122847644 122848264 Mal1g3241 1 51886323 51886898 PCT