Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4336 ATGCAAATGGAAAACCAGAATCTTCATCATCACCAAGAACAGCAACAGCAACAACACTATGGTAGTAATAGTATCACTGATCTGAGACAACTCATTAGTATTGGACAAAGATCAACTACCAATTTCCCCACGGCGGAGTTATTCCCGGCCGGCAACCCGAATCTGCCACATCATCAAAACCACTATGAAATGATGATGTTTGGTCGCCAAGTAGCAGATATAATGCCTCGTTCATCATTTCATGACTTTGTTTCAACAGATTCTGCTGCTGTGTCCGTTACTGCTGCCACTCCCACCAACACCACCACTAGTGCTTCATTTAGTGGTAATTTAGAGGCTGAAGCTACTGGTTACATAGGTTTTGATGCTTCAACTGGAAGATGGCCTAGACAAGAGACTCTTACTCTTCTTGAGATTAGATCTCGTCTAGATCCTCAATTTAAAGAAGCTACTCAAAAAGGTCCTCTTTGGGATCAACTTTCTAGGATAATGTGTGAAGAGCATGGATATCAAAGGAGTGGGAAAAAATGCAGGGAGAAATTTGAGAATCTATACAAATACTATAAGAAAACAAAGGAAGGAAAAGCAGGAAGACAAGATGGAAAACACTACAGGTTCTTTCGTCAACTCGAAGCCTTATATGGCGAAAACAATAACCCTTCTTCATCTTCAATCCCACAAAACAATTTTTGTAGCAACAACAACAATAATCAAGAAATGTTTCATTCTCACAACAAACATTGTGATAGTCTCAGCCTCACAAACTCCACTGAATTTGACACAACATCATCTGATGACGTCAATGATCATAGCATTGAGGGACTCAAGGAGAATGAGTGTTCTATGGAGAAGAGAAAAAAGAGTAGTAGTGGAAGAAGCTTCTGGAAGGTAAAGATAAAAGACTTCATTGATTCTCAGATGAAGAAATTGGTGGAGAAACAAGAGGAATGGTTGGAGAAACTGACAAAGACATTGGAACAGAAAGAAAAAGAGAGGGTGTTAAGAGAAGAAGAGTGGAGGAGACAAGAGAAAGAAAGGTTGGAAAAAGAGCAAGAATTTTGGACTAAAGAAAGAGCATGGATTGAAGCTAGGGATGCTGCTTTAATGGAAGCTTTGCAAAAATTAGCAGGAAATAATGAGATAATAAATAAAACTCAATCTTCTCATGCTACAAACAAGAAGAGAAAGGAAAATTCAAGAAGCTGTTTTTACTTTGATGATAACAACAATGTTGATCGGTCTTGTTTATTTAATGTTAGCAATGGAGATGGAGCTTCCTATTGTGATGTTAATAATCAAAGAGAAGAACTTGGGAGAGCACAAACAAATGATGGTTCAAATTCTAATAATGTTGTTGTTGCGGCTGAAAGTTGCTTTCCGTTCTTGATGAGTACTGAGGGAGGAAATTTGTGGGAGAATTATAGCTTAAAGGTTAATAAAGCAAACCAAAACCAGTGA 1458 0.3813 MQMENQNLHHHQEQQQQQHYGSNSITDLRQLISIGQRSTTNFPTAELFPAGNPNLPHHQNHYEMMMFGRQVADIMPRSSFHDFVSTDSAAVSVTAATPTNTTTSASFSGNLEAEATGYIGFDASTGRWPRQETLTLLEIRSRLDPQFKEATQKGPLWDQLSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENNNPSSSSIPQNNFCSNNNNNQEMFHSHNKHCDSLSLTNSTEFDTTSSDDVNDHSIEGLKENECSMEKRKKSSSGRSFWKVKIKDFIDSQMKKLVEKQEEWLEKLTKTLEQKEKERVLREEEWRRQEKERLEKEQEFWTKERAWIEARDAALMEALQKLAGNNEIINKTQSSHATNKKRKENSRSCFYFDDNNNVDRSCLFNVSNGDGASYCDVNNQREELGRAQTNDGSNSNNVVVAAESCFPFLMSTEGGNLWENYSLKVNKANQNQ* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4336 485 MobiDBLite consensus disorder prediction 1 20 - -
Mal3g4336 485 PANTHER - 39 386 - -
Mal3g4336 485 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 381 479 - -
Mal3g4336 485 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 39 386 - -
Mal3g4336 485 Gene3D - 128 190 - -
Mal3g4336 485 Coils Coil 311 338 - -
Mal3g4336 485 Pfam Myb/SANT-like DNA-binding domain 127 213 IPR044822 -
Mal3g4336 485 PANTHER - 381 479 - -
Mal3g4336 485 MobiDBLite consensus disorder prediction 217 237 - -
Mal3g4336 485 ProSiteProfiles Myb-like domain profile. 120 185 IPR001005 -
Mal3g4336 485 CDD GT1 127 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4336 Mal-Chr3 122823876 122826092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4336 391 480 Trihelix Transcription Factor Family AT5G03680 30.693 7.25e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal3g4336 Myb_DNA-bind_4 6.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4336 - - cam:101499561 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4336 3 122823876 122826092 Mal1g3240 1 51785770 51788816 PCT