Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4335 ATGGAAGGCCATAATCTTCATCATCACCCTGAACAGCAACAGCAACAACACTATGGTAGTAATAGTATCACTGATCTGAGACAACTCATTAGTATTGGACAAAGATCAACTACCAATTTTCCCAAGGCGGAGCTATTCCCCGCCGGCAACCCAAATCTGCCACATCATCAACAACACTATGAAATGATGATGTTTGGTCGCCAAGTAGCAGATATAATGCCTCGTTCATCATTTCATGACTTTGTTTCAACAGATTCAGCTGCTGTGTCTGTTACTGCTGCCACTCCCACCAACACCACCACTAGTGCTTCATTTAGTGGTAATTTAGAGGCTGAAGCTACTGGTTACATAGGTTTTGATGCTTCACCAGGAAGATGGCCTAGACAAGAGACTCTTATTCTTCTTGAGATCAGATCTCGTCTAGATCCTCAATTCAAAGAAGCTACTCAAAAGGGTCCTCTTTGGGATCAACTTTCTAGGATAATGTCCGAAGAACATGGTTACCAGAGGAGTGGGAAAAAATGCAAGGAGAAGTTTGAGAATCTATACAAATACTACAAAAAAACAAAAGAAGGAAAATCAGGAAGACAAGATGGAAAACATTATAGGTTCTTTCGTCAACTTGAAGCCTTATATGGTCAAAACAATATTAACCCTTCTTCATCTTCACTCCCACAAAACAATTTTTGTACAAACAACAACAATCAAGAAATGTTTCATTCTCACAACAAACATTGTGATAGTCTCAGCCTCACAAACTCCACTGAATTCCACACATCATCATCCGATGATGACAATGATCATAGTACTCATGAGGGACTCAAAGAGAATGAGTGTTCCATGGAGAAGAGAAAAAAGAGTAGTAGTGGAAGAAGCTTCTGGAAGGTAAAGATAAAAGACTTCATTGATTCTCAGATGAAGAAATTGGTGGAGAAACAAGAGGAATGGTTGGAGAAACTCACTAAGACATTGGAACTGAAGGAAAAGGAGAGAGTGATAAGAGAAGAAGAGTGGAGGAAACAAGAGAAAGAAAGGTTGGAAAAAGAGCACAAATTTTGGGCTAAAGAAAGAGCATGGATTGAAGGTAGGGATGCTGCTTTAATGGAAGCTTTGCAAAAATTAACAGGAAATGATGAGATTATAAATAAAAATCAATTTTCTCATGATGGAAACAAGAAGAGAAAGGAAAACTCAAGCTGTTTTTACTTTGATGATAACAACAATGTTGATCGGTCTTGTTTATTTAATGTTAACAATGGAGATGGAGCTTCCTATTGTGATGTTAATGATCGAAGAGAAGAACTTGGGAGAGCACAAACAAATGATGGTTCAAATTCTAATAATGTTGTTGCGGCTGAAATATGCTTTCCGTTCTTGATGAGTACTGAGGGAGGAAATTTGTGGGAGAATTACAATTTGAAGGTTAACAAAGCAAACCAAAACTAG 1446 0.3811 MEGHNLHHHPEQQQQQHYGSNSITDLRQLISIGQRSTTNFPKAELFPAGNPNLPHHQQHYEMMMFGRQVADIMPRSSFHDFVSTDSAAVSVTAATPTNTTTSASFSGNLEAEATGYIGFDASPGRWPRQETLILLEIRSRLDPQFKEATQKGPLWDQLSRIMSEEHGYQRSGKKCKEKFENLYKYYKKTKEGKSGRQDGKHYRFFRQLEALYGQNNINPSSSSLPQNNFCTNNNNQEMFHSHNKHCDSLSLTNSTEFHTSSSDDDNDHSTHEGLKENECSMEKRKKSSSGRSFWKVKIKDFIDSQMKKLVEKQEEWLEKLTKTLELKEKERVIREEEWRKQEKERLEKEHKFWAKERAWIEGRDAALMEALQKLTGNDEIINKNQFSHDGNKKRKENSSCFYFDDNNNVDRSCLFNVNNGDGASYCDVNDRREELGRAQTNDGSNSNNVVAAEICFPFLMSTEGGNLWENYNLKVNKANQN* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4335 481 MobiDBLite consensus disorder prediction 260 284 - -
Mal3g4335 481 Gene3D - 126 188 - -
Mal3g4335 481 PANTHER - 36 383 - -
Mal3g4335 481 PANTHER - 380 476 - -
Mal3g4335 481 ProSiteProfiles Myb-like domain profile. 124 183 IPR001005 -
Mal3g4335 481 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 380 476 - -
Mal3g4335 481 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 36 383 - -
Mal3g4335 481 MobiDBLite consensus disorder prediction 255 284 - -
Mal3g4335 481 Pfam Myb/SANT-like DNA-binding domain 125 211 IPR044822 -
Mal3g4335 481 Coils Coil 310 346 - -
Mal3g4335 481 CDD GT1 125 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4335 Mal-Chr3 122812541 122814927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4335 125 380 Trihelix Transcription Factor Family AT5G03680 56.985 5.15e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal3g4335 Myb_DNA-bind_4 3.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4335 - - cam:101499561 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4335 3 122812541 122814927 Mal3g4335 3 122812541 122814927 ECH