Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4328 ATGGAGTTTTGGGGTGTTGAGGTAAAACATGGAGAATCACTCAAGGTTGATCCAAAAGAGGACGAGATTATCCACATGTCAACGGCTTGTCTGGGGGAGGTCAGCAATGATAAAGGGAGTGAACCAGTATCCCTGTATGTGATGATTGCTGGTCAGAAGCTTCAACTTGGAACACTTTCTTCAGATAAAATTCCTCAGACATCTTTTGATTTGGCATTTGAGAAGCAATTTGAGCTATCCCATAACTGGAAATATGGGAGTGTCTTCTTTACTGGGTTTAAAGTCGAATGTTGCCTGGAATCTTCATATCCTTTTAATACTATTTTATATTCGGAAGGGGAAGATATTCCACTTGATGCTGCTAATGGGAAACCTGTGTTGGAGGTGAATGGTGCCAAACCCGTTGTAAACGAAGCTCAACAAAAGAATACATCAGATTCAAGAAAGAATCATAAGGATAATGAAAAGGATGCTAGTATTGACGATGAAGAAGATTCAGATTCATCTGATGAGGATGAGGATGAGGATGAGGATTCTAGTGAAGATGAGCCCGTGGTGAATGGTCAAATTGAAAGTGGTGAAGAAGATGATGATAGCGATGAAGATGATGATGATTCTGATGAGGAGGAGACACCGAAGAAGACTAAAGGAAGCAATAAAAGGGTTGCTGAATCTTCCAAGGAAACACCTGTACCTGTGAAGAAGGCAAAATTTGTTACTCCAGAGAAGACTGGTGGCAAGAGTAGTGTCCATGTTGATACTCCTTACCCTAAGCAGACTGGTAAATCTGCTGCAAATAACAAGCAGCCAGTGAAGGAGCAGACTCCAAAGTCAAGTGGAGATTACAGCTGCAAGCCCTGTAACAGGTCATTTAAGACTGAAGATGCCTTAGGTTCTCATAACAAGGCCAAGCACAGTGCCAAGTGA 927 0.4186 MEFWGVEVKHGESLKVDPKEDEIIHMSTACLGEVSNDKGSEPVSLYVMIAGQKLQLGTLSSDKIPQTSFDLAFEKQFELSHNWKYGSVFFTGFKVECCLESSYPFNTILYSEGEDIPLDAANGKPVLEVNGAKPVVNEAQQKNTSDSRKNHKDNEKDASIDDEEDSDSSDEDEDEDEDSSEDEPVVNGQIESGEEDDDSDEDDDDSDEEETPKKTKGSNKRVAESSKETPVPVKKAKFVTPEKTGGKSSVHVDTPYPKQTGKSAANNKQPVKEQTPKSSGDYSCKPCNRSFKTEDALGSHNKAKHSAK* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4328 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 282 308 IPR013087 -
Mal3g4328 308 Pfam C2H2-type zinc finger 282 306 - -
Mal3g4328 308 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Mal3g4328 308 Gene3D Nucleoplasmin core domain 1 97 - -
Mal3g4328 308 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 304 - -
Mal3g4328 308 MobiDBLite consensus disorder prediction 209 231 - -
Mal3g4328 308 MobiDBLite consensus disorder prediction 253 286 - -
Mal3g4328 308 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 304 - -
Mal3g4328 308 MobiDBLite consensus disorder prediction 159 208 - -
Mal3g4328 308 MobiDBLite consensus disorder prediction 131 308 - -
Mal3g4328 308 MobiDBLite consensus disorder prediction 144 158 - -
Mal3g4328 308 ProSitePatterns Zinc finger C2H2 type domain signature. 284 305 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4328 Mal-Chr3 122651007 122655279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4328 1 97 C2H2 Transcription Factor Family AT5G03740 51.546 5.90e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal3g4328 NPL 3.8e-08 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4328 - - ccaj:109796568 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4328 3 122651007 122655279 Mal3g4328 3 122651007 122655279 ECH