Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4312 ATGGAATCCAATGGACTAGGTGGTGGAGTATATCCTACCATCAATAATGGATTTCTAGGAGTAGAAAACCCTTCAAAACAACAACAACAACAACAACAACAAAACCATCAAAATCAACAAAATCCTCACACTTTGCATCATCACCAAATGGTGTCCTATGATCAACCCCATCAACCAATCAAACAAGGCTACCCTTATTCATCCAAAACCAACAACAACAAACCACATCAAATCAACCTCAGTGATGAAGATGAACCATGTTTTGGAGCAGATGAAACCTCTGGTGGTGACCCAAAAAGAAAAGGATCACCATGGCATAGAATGAAATGGACAGATACAATGGTAAGACTCTTAATAATGGCTGTTTATTATATTGGTGATGAAGCTGGTACTTCAGAATTAAGTGCTGATAAAAAGAAAGCAAATGGTTTGTTACAAAAGAAAGGAAAATGGAAATCAGTTTCTAAAGGGATGATGGAAAAAGGCTACTATGTGTCTCCTCAACAATGTGAAGACAAGTTCAATGATTTAAACAAAAGGTACAAAAGAGTCAATGATATACTTGGTAAAGGAACAGCTTGTAGAGTTGTTGAAAATCAAAGTTTGTTGGATACTATGGATTTGTCTATAAAAATGAAAGAAGAAGCAAGAAAACTTTTGAATTCAAAGCACCTTTTCTTTAGAGAAATGTGTGCTTATCATAATAGTTGTGGTCATGGAAACAACAACAATTTGCAACAACAATCTTCAAATGAAGCTCAACCATCACAACAACATCAGCATCAACAACAACAACCGCAACAACAACAATGTTTGCATTCATCAAATGGGGTAGGAATGTTGAAACTAAAAGGGAAAAGTGGAGAAGAGGAAGATGATGAAGACGAAGATGAAGAATGGGAAGATGATTCTGAAGAGGAAGAAGAAGAATCAGGAGAAGGTGGTGGTTATGGTTCAAAGGGTCATGAAGAAGACGAAAATATTGATCATTTAAGGAAGAAATCAAGAAAAGTTTCATCATTACCATCACAGGTTATGCAACAGTTGAGTAGTGAAGTGATGAGTGTGTTACAAGATGGAGTGAAGAGTTGTTGGGAGAAGAAGCAATGGATGAAGAAGAAAGTGGTGCAGTTAGGGGAAGAACAAATAAACTATCATGTGGAAGCATTTGAGATTGAAAAGCAAAGGTTAAAATGGGTGAAATTTAGTAGTAATAAAGAAAGGGAATTGGAGAGACAAAGACTTGAAAATGAAAGGAAGAGTTTGGAGATTGATAGAATGGTTTTGTTGCTACGTCAAAAGGAGCTTGAATTGCATAACACTCAGCAAATGCAGCAGCAGCAACATTCTTCTACTTAG 1359 0.3635 MESNGLGGGVYPTINNGFLGVENPSKQQQQQQQQNHQNQQNPHTLHHHQMVSYDQPHQPIKQGYPYSSKTNNNKPHQINLSDEDEPCFGADETSGGDPKRKGSPWHRMKWTDTMVRLLIMAVYYIGDEAGTSELSADKKKANGLLQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMDLSIKMKEEARKLLNSKHLFFREMCAYHNSCGHGNNNNLQQQSSNEAQPSQQHQHQQQQPQQQQCLHSSNGVGMLKLKGKSGEEEDDEDEDEEWEDDSEEEEEESGEGGGYGSKGHEEDENIDHLRKKSRKVSSLPSQVMQQLSSEVMSVLQDGVKSCWEKKQWMKKKVVQLGEEQINYHVEAFEIEKQRLKWVKFSSNKERELERQRLENERKSLEIDRMVLLLRQKELELHNTQQMQQQQHSST* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4312 452 MobiDBLite consensus disorder prediction 56 104 - -
Mal3g4312 452 MobiDBLite consensus disorder prediction 242 276 - -
Mal3g4312 452 Gene3D - 110 183 - -
Mal3g4312 452 MobiDBLite consensus disorder prediction 242 325 - -
Mal3g4312 452 MobiDBLite consensus disorder prediction 1 43 - -
Mal3g4312 452 Coils Coil 290 310 - -
Mal3g4312 452 MobiDBLite consensus disorder prediction 18 43 - -
Mal3g4312 452 Pfam Myb/SANT-like DNA-binding domain 107 232 IPR044822 -
Mal3g4312 452 Coils Coil 403 432 - -
Mal3g4312 452 PANTHER F16F4.11 PROTEIN-RELATED 1 452 - -
Mal3g4312 452 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 452 - -
Mal3g4312 452 MobiDBLite consensus disorder prediction 61 77 - -
Mal3g4312 452 MobiDBLite consensus disorder prediction 290 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4312 Mal-Chr3 122489003 122490361 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal3g4312 Myb_DNA-bind_4 2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4312 - - gmx:100808934 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4312 3 122489003 122490361 Mal3g4312 3 122489003 122490361 ECH
Mal3g4312 3 122489003 122490361 Mal1g3196 1 49184714 49186189 PCT