Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4296 ATGATTGTTGAATCAAACAGGAAACAAAGTTTCCATTTTAGTTATGCCTTTCTTCTCTGCCTTTTCCTCTGTCATTATACTTGTTCACAAAAGACTTGTCCAAACTGTGGCTCTATGGAAGTTCCATACCCTTTGAGCACAGAACCAAACTGTGGTGATCCATACTATAGGCTTCGTTGTGATCGTCATTTTCAAAAGCTTTACTTTGACACTCTCAATGGCAGTTCCTATGTTGTACTCAGAATCATGTCTTCGATCCAGCGCATGGTGTTGCAGCCACCACCTTGGTTACCTGGTTCATGTGTCACGCAAGACATGCCGGTAAGCAATGGTATTTGGTTAAATCAGTCACTTCCTTTCAACATAACTTCATCCAACACAGTATTCATTTTCAACTGTTCCCCTCGCCTCTTGGTTTCTCCTCTTAACTGCTCTTCCTCTAGTATTTGTCATCGTTACTTGGAAAATTCAGGTCACGTTGACACAAATCGAGCAGTTGAGTGTGCAAGTGGTCTTCACCCATGTTGCACCTTTGTTTCTGGCGGCATGCCTTCAGCTTACAAGATTCGCCTTCACAGTTCCGGTTGCAAAGCATTCAGAAGCATCCTTCATTTAGACCAAGACAAACCTCCTAATCAATGGGAGGAAGGCCTAGAGATTCAATGGTCTCTTCCACCTGAACCTGTCTGCAGGACACAGAGTGATTGTTCTAGAGACTCTAAGTGTTCCCCTTCTGATAGAGACGCACTCTTTCGCTGTCTTTGCAACAGAGGATTCCACTGGGACCCTTTTGCAGCAACCTGTGTAAGGTACAAGAGAAAATCAAAATGGAAAACAAGCTTGGTTGTCTCAATAGTGGTTATTGTTTTTTTCTCATTGGCTGTGGTTCTTGTCATCATGACAAAGTCCTTCAAACACTCTAAGCAGGCCAAACAAAGAGAAATTGTGCTGAAATCAAACACTGGAGGGGAGAAACCTTACAAAATGTTTCAACTGAAAGAGTTGAAGAAAGCCACAAACTGTTTTTCACAAGACAGGATCTTAGGAAGTGGTGGCTTTGGGGAAGTTTACAAAGGTGAACTTCAAGATGGAACACTTGTAGCTGTCAAGAAAGCTAGAGTTGGTAATCTTAAAAGCACACAACAAGTGCTTAATGAGGTTTCAATACTTTCTCAAGTCAATCACAAGAACCTTGTCAGACTCTTAGGCTGCTGTTTGGAATCTGAGCAACCTTTGATGATCTATGAGTATATCTCAAATGGGACCCTCTATGACCATCTTCATGATAGATATTCCAATTTTCTTGATTGGAAAAAAAGGCTAAAGATTGCTTTTCAAACAGCTGAAGCATTGGCTTACTTGCATTCTTCTGCACACACCCCTATTTACCATAGAGATGTTAAGTCAACAAATATACTATTGGACGATGAATTCGACGCGAAAGTTTCAGATTTTGGACTCTCCAGATTGGCTAACCCGGGACTTAGTCATGTGTCTACCTGTGCTCAAGGGACACTCGGGTACTTGGATCCCGAATACTACCGCAATTATCAGTTAACTGATAAAAGTGATGTTTATAGTTATGGAGTTGTCCTGCTAGAGCTTTTGACATCACAGAAAGCAATAGATTTTTCCCGTGATGAAGATGATGTCAACTTGGTAATTCATGTGAGTCAATATGCAAGCAATGGTGCAATCATGCAAGTGGTTGATCAAAGGCTTTTTCTTTCTATGGAACCTTTAAGCAGTAAATTGGTCACAAGCATAAAACTCTTTTGGGAGCTTGCACATGATTGTCTTAGAGAGAAGAAAGTTGAAAGGCCTAGTATGAGGGATATTGTTGAACGTCTTCTATGCATAATTAGGATTGAAGATCACGAGTGA 1884 0.4103 MIVESNRKQSFHFSYAFLLCLFLCHYTCSQKTCPNCGSMEVPYPLSTEPNCGDPYYRLRCDRHFQKLYFDTLNGSSYVVLRIMSSIQRMVLQPPPWLPGSCVTQDMPVSNGIWLNQSLPFNITSSNTVFIFNCSPRLLVSPLNCSSSSICHRYLENSGHVDTNRAVECASGLHPCCTFVSGGMPSAYKIRLHSSGCKAFRSILHLDQDKPPNQWEEGLEIQWSLPPEPVCRTQSDCSRDSKCSPSDRDALFRCLCNRGFHWDPFAATCVRYKRKSKWKTSLVVSIVVIVFFSLAVVLVIMTKSFKHSKQAKQREIVLKSNTGGEKPYKMFQLKELKKATNCFSQDRILGSGGFGEVYKGELQDGTLVAVKKARVGNLKSTQQVLNEVSILSQVNHKNLVRLLGCCLESEQPLMIYEYISNGTLYDHLHDRYSNFLDWKKRLKIAFQTAEALAYLHSSAHTPIYHRDVKSTNILLDDEFDAKVSDFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDEDDVNLVIHVSQYASNGAIMQVVDQRLFLSMEPLSSKLVTSIKLFWELAHDCLREKKVERPSMRDIVERLLCIIRIEDHE* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4296 627 CDD STKc_IRAK 348 617 - -
Mal3g4296 627 Pfam Protein tyrosine and serine/threonine kinase 344 617 IPR001245 GO:0004672|GO:0006468
Mal3g4296 627 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Mal3g4296 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mal3g4296 627 ProSitePatterns EGF-like domain signature 2. 253 268 IPR000742 -
Mal3g4296 627 Gene3D Transferase(Phosphotransferase) domain 1 418 626 - -
Mal3g4296 627 SUPERFAMILY Protein kinase-like (PK-like) 325 617 IPR011009 -
Mal3g4296 627 SMART serkin_6 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4296 627 ProSiteProfiles Protein kinase domain profile. 342 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4296 627 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 627 IPR045274 GO:0007166
Mal3g4296 627 Gene3D Phosphorylase Kinase; domain 1 300 417 - -
Mal3g4296 627 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 23 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4296 Mal-Chr3 122291772 122293655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4296 33 627 Receptor kinase-like Gene Family AT5G02070 46.326 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal3g4296 PK_Tyr_Ser-Thr 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4296 - - mtr:MTR_7g103180 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4296 3 122291772 122293655 Mal3g4296 3 122291772 122293655 ECH