Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4286 ATGGACACAGTGTTGGTGCCTCCATGGCTTGAACCATTGTTGAAAACACCGTTTTTCAACATTTGTCGGATTCACGCTGACGCAGCTAGAAATGAGTGTAACATGTATTGTTTAGATTGCAACAATGGTGATGGTGCTTTTTGCTTTTATTGTCGTTCTTCAAGACACAAAGACCATCAAGTCATTCAGATAAGAAGATCTTCGTATCACGATGTAGTGAGGGTGTCAGAGATTCAGAAAGTGTTGGACATAAGTGGAGTGCAAACATATGTGATAAACAGTGCTAGAGTTTTGTTCTTGAATGTGAGGCCACAACCAAAATCTGGGAAAGGAGTAGCACACATTTGTGAGATTTGTGGAAGGAGCTTGTTGGATTCATTTCGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGAGATGCAAGCTTTGCTTTGGAGGGTAAGAATGAAGCATTGACAATGGAAGGAGTGTCAAGTAGTAGATCAGAAGAAGAATTGCGTGAAGGCTCAACACAAGATATGTATCCTCTCACGCCTCCTCCACCTCCTTTAAATGCAAGGAGAAGAAAAGGTATACCTCATAGGGCACCTTTTGGTTCCTCATTCTAA 621 0.409 MDTVLVPPWLEPLLKTPFFNICRIHADAARNECNMYCLDCNNGDGAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLERIKKNGDASFALEGKNEALTMEGVSSSRSEEELREGSTQDMYPLTPPPPPLNARRRKGIPHRAPFGSSF* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4286 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 203 - -
Mal3g4286 206 MobiDBLite consensus disorder prediction 158 206 - -
Mal3g4286 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 203 - -
Mal3g4286 206 SUPERFAMILY B-box zinc-binding domain 19 66 - -
Mal3g4286 206 Pfam PLATZ transcription factor 65 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4286 Mal-Chr3 122187093 122189308 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal3g4286 PLATZ 8.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4286 - - gmx:100803076 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4286 3 122187093 122189308 Mal1g3165 1 48889197 48890318 PCT