Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4279 ATGAAATTCAACAGAACCCTCTTTTGGCTTTCTGGCTTTGTCATCTTTCTCTTTTCTATCATCATTGTTCACTACACCACACCACCTTCCAACACATCTAACACTGCCACTAGTAGTTCTCAAGGTAGTTTCAGTTTTCAACTTGGCATATTAAGCAAGATTATAAAGCTAAGCGGCATTCAAGATTTTGTGTCTTTGTTGATAACAAGTATTGCGAGTAGAAGACATCATCATTGGAATAGGCATAAGGAAAAATGTGACAAGACCAAATGGGCTTCCCAGCTAATTTTAGACTATAATGCGACCATCACTTTTACAGTTGACTTAAAGGGTCATGCTAACTTTAGTAGCGTGCAGAAAGCGGTTGATGCTGTTCCTGAATCTAGCTCTGATACCACCCTTATTATAATAAATTCTGGTACATATAGAGAGAAGGTTGTGGTCCAAGCCAACAAAACAAACTTAATCCTGCAAGGTCAAGGCTATCTTAGTACAATCATAGAATGGAGTGACACTGCAAATTCCACCGGAGGGACTTCCTATAGCTACTCTTTCGCTGTCTTTGCTTCAAAGTTCACTGCGTACAACATTAGCTTTAAGAACACTTCTCCTCCACCTTCACCAGGAGAGGTTGGGGCACAGGCAGTGGCACTGAGAGTTACTGGTGATCAAGCCGCATTCTACGGATGTGGTTTCTATGGTGCGCAGGACACACTCAATGATGATAGTGGAAGACATTATTTTAAGGAATGTTTCATTCAAGGATCCATTGATTTTATATTTGGAAATGCTAGATCACTTTACGAGGATTGTACCATAAACTCTATAGCAAAACAAGATTTGGTTGGGGTTGGTGGATCTATCACAGCTCAAGGACGACAATCATTGAAGGAACAAACAGGATTTTCCTTTGTGAATTGCAACATTGTTGGAAGTGGAAAAGTGTGGCTTGGAAGAGCTTGGGGAGCATTTGCCACAGTTGTTTTTTCAACAACAAACATGTCTGATGTCGTAGCTGCGGAGGGATGGAACGATTGGAGAGATCCATCTAGAGACCAGACTGTCTTCTTTGGGGAGTACCATTGTATAGGACTTGGAGCAAATTATACATCTAGAGTCTCTTATGCAAGACAACTCAGTGATTTTGAAGCAATCTCCTATATAAATGTTTCATACATTGATGGGAATGATTGGCTTTTTAACTATTTAACTTAA 1215 0.4008 MKFNRTLFWLSGFVIFLFSIIIVHYTTPPSNTSNTATSSSQGSFSFQLGILSKIIKLSGIQDFVSLLITSIASRRHHHWNRHKEKCDKTKWASQLILDYNATITFTVDLKGHANFSSVQKAVDAVPESSSDTTLIIINSGTYREKVVVQANKTNLILQGQGYLSTIIEWSDTANSTGGTSYSYSFAVFASKFTAYNISFKNTSPPPSPGEVGAQAVALRVTGDQAAFYGCGFYGAQDTLNDDSGRHYFKECFIQGSIDFIFGNARSLYEDCTINSIAKQDLVGVGGSITAQGRQSLKEQTGFSFVNCNIVGSGKVWLGRAWGAFATVVFSTTNMSDVVAAEGWNDWRDPSRDQTVFFGEYHCIGLGANYTSRVSYARQLSDFEAISYINVSYIDGNDWLFNYLT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4279 404 Pfam Pectinesterase 106 396 IPR000070 GO:0030599|GO:0042545
Mal3g4279 404 Gene3D - 99 402 IPR012334 -
Mal3g4279 404 SUPERFAMILY Pectin lyase-like 102 400 IPR011050 -
Mal3g4279 404 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 401 - -
Mal3g4279 404 ProSitePatterns Pectinesterase signature 2. 253 262 IPR033131 -
Mal3g4279 404 PANTHER PECTINESTERASE 14-RELATED 11 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4279 Mal-Chr3 122102111 122104555 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4279 97 399 Carbohydrate Esterase AT1G05310 56.209 1.23e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4279 - - gmx:100802034 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4279 3 122102111 122104555 Mal1g1634 1 21399795 21402361 PCT