Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4277 ATGCCGTTTTCCCCCACTGCTAACACCACCATTAGTCATGGTAGTTTATGCAATATAAGTTTACATGTTGGCTTATTAAACAAGATTATGAATTTCATTGACCCTCAAGATTATGTGTCCTTGCTAATGACAAGTATTAAAAGTATGATAAATCATCATGGGATGATGCATAAGGAAAACTGTGAGGAGACCAAATGGGCTTCTAGGCTAATTTCAAAATATAATGTAACTCTTGTTCTTAGAGTTGACTCAAAGGGGTGTGGTAACTTTACAAAAGTACAAGAAGCTGTTAATGCTGTTCCTGACTCAAATCCTCATGCCACCCTTATCATACTCAATTCTGGAACATACAAGGAGAAGGTGATGGTTAATGCCAAAAAAATAAACTTGATACTACAAGGTCAAGGGTATCTCAATACAGTCATAGAATGGAATGACAATGCAAATTCCACGGGAACATACGATAGCTACTCGTTTGGTGTCTTTGCTTCTAAATTTATTGCTTACAACATTAGCTTTAAGAAATGCATCATAAATTCTATAGCAAAACTAGAGTGGGGTGGAAATGGTGGATATATCACAGCTCAACAACGTGAATCGTTGACGAATAGAACAGGGTTTTCATTTGTGAATTGTCATATTGATGGACCTGGAACGATAAAAACATCACCCCCAAGAGCCTCTTATGGAAAGCAACTCAAATATTTTGAAGCTGCTCCCTACATGAGTATTTCATACATTAATGGAAGTGATTGGCTTCATGAATTTTAG 771 0.3658 MPFSPTANTTISHGSLCNISLHVGLLNKIMNFIDPQDYVSLLMTSIKSMINHHGMMHKENCEETKWASRLISKYNVTLVLRVDSKGCGNFTKVQEAVNAVPDSNPHATLIILNSGTYKEKVMVNAKKINLILQGQGYLNTVIEWNDNANSTGTYDSYSFGVFASKFIAYNISFKKCIINSIAKLEWGGNGGYITAQQRESLTNRTGFSFVNCHIDGPGTIKTSPPRASYGKQLKYFEAAPYMSISYINGSDWLHEF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4277 256 PANTHER PECTINESTERASE 14-RELATED 173 220 - -
Mal3g4277 256 PANTHER PECTINESTERASE 14-RELATED 39 174 - -
Mal3g4277 256 Gene3D - 73 174 IPR012334 -
Mal3g4277 256 Gene3D - 175 245 IPR012334 -
Mal3g4277 256 PANTHER PECTINESTERASE 14-RELATED 216 254 - -
Mal3g4277 256 Pfam Pectinesterase 82 175 IPR000070 GO:0030599|GO:0042545
Mal3g4277 256 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 173 220 - -
Mal3g4277 256 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 174 - -
Mal3g4277 256 SUPERFAMILY Pectin lyase-like 78 254 IPR011050 -
Mal3g4277 256 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 216 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4277 Mal-Chr3 122080311 122082525 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4277 75 173 Carbohydrate Esterase AT1G05310 48.000 2.00e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4277 - - gmx:100802034 194.126