Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4275 ATGAATTTCATTGACCCTCAAGACTATGTGTCCTTGCTAATGACAAGTATTAAAAGTATGATAAATCATCATGGGATGATGCATAAGGAAAATTGTGAGGAGACCAAATGGGCTTCTAGGCTAATTTCAAAATATAATGTAACTCTTGTTCTTACAGTTGACTCAAAGGGGTGTGGTAACTTTACTAAAGTACAAGAAGCTGTTAATGCTGTTCCTGACTCAAATCCTCATGCCACCCTTATCATACTCAATTCTGGAACATACAGGGAGAAGGTGATGGTTAATGCCAAAAAAATAAACTTGATACTACAAGGTCAAGGGTATCTCAATACAGTCATAGAATGGAATGACAATGCAAATTCCACGGGAACATACGATAGCTACTCGTTTGGTGTCTCTGCTTCTAAATTTATTGCTTACAACATTAGCTTTAAGAACACGGCTCCTCCAGCAAAACCCGGAGATAAGGACAAACAGGCAGTGGCGCTAAGAGTTAACGGTGATCAAGCCGCATTCTATGGATGCGGGTTTTATAGTGCACAAGATACACTCCTTGATGATCAAGGGAGACATTACTTTAAAGAATGTTTCATCCAAGGATCTATTGATTTCATATTTGGAAATGCTAGATCACTTTATGAGAAATGTATCATAAATTCTATAGCAAAACCAGAGTGGGGTGGAAATGGTGGATATATCACAGCTCAACAACGTGAATCGTTGACGAATAGAACAGGGTTTTCATTTGTGAATTGTCATATTGATGGTACTGGGAAGATATTGCTTGGAAGACCTTGGAGACCATTTGCCACAGTGATTTTTTCAACAACATACATGTCTAATGTTGTAGCTGCTCAGGGATGGACTGATAAAATGAATAATATCAATCGAACTTTTTTCTTCGGAGAGTACAATTGTACAGGACCTGGAGCGATAAAAACATCACCCCCAAGAGCCTCTTATGGAAAGCAACTCAAATATTTTGAAGCTGCTCCCTACATGAGTATTTCATACATTAATGGAAGTGAATGGCTTCATGAATTTTAG 1047 0.3811 MNFIDPQDYVSLLMTSIKSMINHHGMMHKENCEETKWASRLISKYNVTLVLTVDSKGCGNFTKVQEAVNAVPDSNPHATLIILNSGTYREKVMVNAKKINLILQGQGYLNTVIEWNDNANSTGTYDSYSFGVSASKFIAYNISFKNTAPPAKPGDKDKQAVALRVNGDQAAFYGCGFYSAQDTLLDDQGRHYFKECFIQGSIDFIFGNARSLYEKCIINSIAKPEWGGNGGYITAQQRESLTNRTGFSFVNCHIDGTGKILLGRPWRPFATVIFSTTYMSNVVAAQGWTDKMNNINRTFFFGEYNCTGPGAIKTSPPRASYGKQLKYFEAAPYMSISYINGSEWLHEF* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4275 348 PANTHER PECTINESTERASE 14-RELATED 19 346 - -
Mal3g4275 348 Gene3D - 45 348 IPR012334 -
Mal3g4275 348 ProSitePatterns Pectinesterase signature 2. 198 207 IPR033131 -
Mal3g4275 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 19 346 - -
Mal3g4275 348 SUPERFAMILY Pectin lyase-like 48 346 IPR011050 -
Mal3g4275 348 Pfam Pectinesterase 52 341 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4275 Mal-Chr3 122076095 122078225 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4275 46 346 Carbohydrate Esterase AT1G05310 50.163 1.53e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4275 - - gmx:100802034 433.335