Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4214 ATGCAAGTAGTCTTGTCTGGTATTATGAAGTGTTTTCCATTCCACTCTGGAGATAAGAAAGATGAACCGAAAGGCTTGCAATCTGCGTCTGGCCGTTCTGACAGTTCCGCGTATGTTGATGTTGAAGGTAGAAGATGTGGTTCTGAATTGAATTCTCAGGATGTCTCGGATAGTGGCAGCGTGGAATCTCTCAGGAGGAATGTACCTCCTAATATGTCCCAAAGGCCTAGTAATCTTAGAGTGTTTACTGTCTCTGAACTGAAATCCGCCACAAAGAATTTCAGTCGATCGGTTATGCTTGGAGAGGGTGGGTTCGGGTGTGTCTATCAGGGAGTAATTAGAAGTGTAGATGATCCATCTAGAAGAATTGAGGTTGCAGTTAAACAACTCAGTAAAAGAGGAGTGCAGGGGCATAGGGAATGGGTGACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGATACTGTGCCGATGATGACGAAAGAGGAATCCAACGGCTTTTGATTTATGAATACATGCCAAACAGAAGCGTGGAACATCATTTATCTCACCGAGCAGAGACTCCTCTCCCATGGAATAGGAGACTAAAAATAGCACAAGATGCAGCTCGTGGATTAACATACCTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGATCAGTGGAATGCAAAGCTATCAGACTTTGGGTTAGCGAGACTGGGACCTTCGGATGGACTAACTCATGTTTCAACAGCGGTAGTAGGAACAATGGGATATGCAGCTCCTGAATATATCCAAACAGGACGTCTCACGTCAAAGAATGATGTATGGGGCTACGGTGTTTTCCTGTATGAACTTATTACTGGCAGGCGCCCTTTAGATCGAAATCGCCCCAAAGGTGAACAAAAGCTGTTGGAATGGATAAAGCCATACCTATCTGATGCAAAGAAATTTCAACTGATATTGGATCCAAGACTTGATAAGAAACAAGTATTCAAATCAGCCCAAAGACTTGCTACGATAGCTAGCCGATGCTTAGTTAAAAACCCTAAGAATCGTCCAAAGATGAGCGAGGTTTTGAAAATGGTGAATGGAATAGTAGAATCATCATCCGATGCTAATTCACAACTACCCTTGAAGAATGTTTCGAGAGTAGAAGTTTCTCATGAAACTGAAATGAAGAACACAAAGAAGCGGACCATGGAACAGAAGCCTAGAGAAAGTAATTGGTTCGTTAGGATGTGGAGACCAAAGCTAGTAAGAACATGA 1305 0.4238 MQVVLSGIMKCFPFHSGDKKDEPKGLQSASGRSDSSAYVDVEGRRCGSELNSQDVSDSGSVESLRRNVPPNMSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYQGVIRSVDDPSRRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRAETPLPWNRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYIQTGRLTSKNDVWGYGVFLYELITGRRPLDRNRPKGEQKLLEWIKPYLSDAKKFQLILDPRLDKKQVFKSAQRLATIASRCLVKNPKNRPKMSEVLKMVNGIVESSSDANSQLPLKNVSRVEVSHETEMKNTKKRTMEQKPRESNWFVRMWRPKLVRT* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4214 434 CDD STKc_IRAK 100 378 - -
Mal3g4214 434 ProSiteProfiles Protein kinase domain profile. 94 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4214 434 MobiDBLite consensus disorder prediction 48 75 - -
Mal3g4214 434 Pfam Protein kinase domain 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4214 434 MobiDBLite consensus disorder prediction 49 75 - -
Mal3g4214 434 PANTHER OS01G0588500 PROTEIN-RELATED 17 430 - -
Mal3g4214 434 SUPERFAMILY Protein kinase-like (PK-like) 73 375 IPR011009 -
Mal3g4214 434 ProSitePatterns Protein kinases ATP-binding region signature. 100 128 IPR017441 GO:0005524
Mal3g4214 434 Gene3D Transferase(Phosphotransferase) domain 1 180 402 - -
Mal3g4214 434 PANTHER KINASE 1B 17 430 - -
Mal3g4214 434 MobiDBLite consensus disorder prediction 19 38 - -
Mal3g4214 434 Gene3D Phosphorylase Kinase; domain 1 66 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4214 Mal-Chr3 121279617 121282355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4214 80 390 Glycoside Hydrolase AT3G07070 45.048 3.17e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal3g4214 Pkinase 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4214 - - gmx:100813060 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4214 3 121279617 121282355 Mal3g4214 3 121279617 121282355 ECH