Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4213 ATGACAATTAATACGACACCGAGTGTTGGTCTGGAATTTGATAGCATAGAAACGGCTTGGCAATTTTGGGTTGAATATGGTAGAAAATGTGGTTTTGGAGTTAGAAAGCATTACTTGAACAAAAGAAAGGTAGATGATTTGATTACATCTGGAAGATTTGTTTGCTGCAAAGAGGGAACTAGGTTGACAGACAAAAGATCATTTTTGGTTAAAAAACCCAGGGCTGAAACAAGAACAGGGTGTCCAGTTGGAATTTCACTTAGTCTAAAAAATGGAAAGTATGCAATACAAGTGTTTGAAGAAAATCACAACCATCTTTTACAACGCCCAGAAACAACACACATGCTAGCATCGCATCGTAAAATATCAGAAGTTCAAGCATATGAGATCGAAATGGCAGAGAGCTCTGGACTAATGCAAAAGGCTTCATTTCAACTTATGAGCACACATGCAGGAGGTAGAACTAATCTGGGATTTACACGATTGGATGTTAAAAACTATCTTAAAGCAAAAAGACAACGTAGCATGGCGTATGGAGAAGTTGGTAGTCTTATGCAGTATTTTCAACGCCAGATGTTGGACAATCCATCATTTTACCACGCATATCAAATGGATTGTGACGAACAAATCACAAACATATTTTGGGCTGATGCAAGAATGATATTGGATTATGGATATTTCGGTGATGTGGTTTCTTTGGATACAACATATTGCACTAATCGCGCTAATCGACCACTTGCATTATTTTCAGGCTTTAACCATTATAGGGGCACAATCCTTTTTGGGGTTGCACTATTATATGATGAAACCTCTGAATCATTCAAATGGTTATTTGAAACATTTCTTGAAGCACATGGAAATAAAAAGCCTCAAACATTGTTCACTGACCAAGACAAAGCAATGGCTAAAGCACTAATTGAGGTGATGCCAGAGACTCGACATGGGTTATGTACATGGCATTTGATGCAGAATGGGATCAAACACCTAGGTAGCTTGATGAAAAGGGAAAATAATTTCTTAACTGAATTTAGTAAGTGCATGTATGAATACGATGAAGAAGTGAAGTTTGAGGCATCTTGGAGAAAGTTGGTTGCAGAATTTGATCTTAATGATAACACTTGGGTGAAATCAATGTATGGTATCAAGAAAAAATGGGCAGCGTGTCACATGAAGAAAGCTTTCACCCTTGGTATGCGAAACACTCAACTTAGTGAGAGCTTAAATTCAAATTTTAAGGCTTGCATGAGCCCTGGTATCAGTGTCACACAGTTCTTCCAGCACTTTGAAAAGGTTGTTGAGGAGAAACGATATAACGAGTTAGTATGTGAGTATGAGTCTCGGCATAAACTACCGAAATTGAGATATCAACATTCACCGATTCTAATGCAACTCGCTCAAGTATACACACATAAAATTTTTGATTTGTTCAATGATGAGTTTTCCTTATTCTTAGCTGCTTGCATACAAGAAAAGAACATGTCTCAACTTCCATTTGAATATGTTATCACCATGTTTAATAAGGAAGGAGATTGGAGAGTACTATTTGATCCAATAAAATCCTCTATATCATGTACTTGTAGAAAGTTTGAGACTTTTGGAATACTCTGTTGTCATGCATTGAAAGTCATTGAGGCAAATGATGTTAAACTCATCCCCAATCAATACATCTTAAAGAGATGGACAAGAGATGCCAGCGACGGTTTTATAATTGATATTAAGGGAAATGAGGTTGTGGACGATCCTAAACTGTCTAGTACACATCGATATAAGCAATTATGCTCCACTATGATTAGATTGGCTGCTGATGTCTCAACATCTGAATATTTGCATAACCTTGTTGAAAAGGGTTTGTATGAGTTGTGTAAACTGGTGATGGAGGCTCGATTACGGGAAATAGAGAAGGCCAATGATGAAGGTGATGTCCCAATAGTAGCAAAAGAATGTGAGACACAAGCAAAGGGGCTTAAGAGTAGGCCTGGATTAACAATCCATAAACGGCTAAAGAGTTGTGTCGAGCTTATGCGTAAGAAAAGAAGTAGAGCAACAACTGTAAAGCCTGCACCAAGTCAAAGTCAAATGGAATATGTGACATCTAGTTTAGAACAATCAACATATGAATTGTCTCAGACAAGGGAGAACAATGCAGGAGTCACTCAATGA 2160 0.3764 MTINTTPSVGLEFDSIETAWQFWVEYGRKCGFGVRKHYLNKRKVDDLITSGRFVCCKEGTRLTDKRSFLVKKPRAETRTGCPVGISLSLKNGKYAIQVFEENHNHLLQRPETTHMLASHRKISEVQAYEIEMAESSGLMQKASFQLMSTHAGGRTNLGFTRLDVKNYLKAKRQRSMAYGEVGSLMQYFQRQMLDNPSFYHAYQMDCDEQITNIFWADARMILDYGYFGDVVSLDTTYCTNRANRPLALFSGFNHYRGTILFGVALLYDETSESFKWLFETFLEAHGNKKPQTLFTDQDKAMAKALIEVMPETRHGLCTWHLMQNGIKHLGSLMKRENNFLTEFSKCMYEYDEEVKFEASWRKLVAEFDLNDNTWVKSMYGIKKKWAACHMKKAFTLGMRNTQLSESLNSNFKACMSPGISVTQFFQHFEKVVEEKRYNELVCEYESRHKLPKLRYQHSPILMQLAQVYTHKIFDLFNDEFSLFLAACIQEKNMSQLPFEYVITMFNKEGDWRVLFDPIKSSISCTCRKFETFGILCCHALKVIEANDVKLIPNQYILKRWTRDASDGFIIDIKGNEVVDDPKLSSTHRYKQLCSTMIRLAADVSTSEYLHNLVEKGLYELCKLVMEARLREIEKANDEGDVPIVAKECETQAKGLKSRPGLTIHKRLKSCVELMRKKRSRATTVKPAPSQSQMEYVTSSLEQSTYELSQTRENNAGVTQ* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4213 719 Pfam MULE transposase domain 230 324 IPR018289 -
Mal3g4213 719 SMART 26again6 522 549 IPR006564 GO:0008270
Mal3g4213 719 MobiDBLite consensus disorder prediction 678 719 - -
Mal3g4213 719 ProSiteProfiles Zinc finger SWIM-type profile. 500 547 IPR007527 GO:0008270
Mal3g4213 719 MobiDBLite consensus disorder prediction 683 719 - -
Mal3g4213 719 Pfam FAR1 DNA-binding domain 21 108 IPR004330 -
Mal3g4213 719 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 626 IPR031052 GO:0006355
Mal3g4213 719 Pfam SWIM zinc finger 518 545 IPR007527 GO:0008270
Mal3g4213 719 PANTHER OS03G0181600 PROTEIN 4 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4213 Mal-Chr3 121274981 121277140 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g4213 MULE 1.1e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4213 - - cam:101507984 816.994