Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4206 ATGAAAGCTAAGAAGAGGAATCGTGTTACTGATGATGGAGGGAATTCCTTTTCAAGGTGCGTCAAGCGATTGACTGAAGAATATAAAGGCAAAACACGACTGGATCCTCGTGGGAAAAATGAAAAAGGAGACGGAGATGTTGTATGTGACAAGTGCTTGCTTGAAGGAACACTCTTGTGCTGTTGTGGTAAAGGATGTCAAAGGAGGTATCACCCGTCTTGTTTGGATCCTCCTCTCAAATTTCTTCCTATAGGGTTTTGGTACTGCATTTTTTGTGTTAAGAAAAAAATAAAGCTTGGTGTGCATTCTGTTTCTAAAGGGGTAGAATCCATATTGGATACCCGAGAAGTCACTTCAAAAGATGAAGTGATCCAAAGAGAGTACTTTGTCAAGTATCAGGACCTCGCTCATGCTCACAACTGTTGGATTCCAGAAAAGCAAATGCTTATTGAGGCTCCAAAGCTTTTGAAAAAGTATGAGAAGACACAACAGGTTGTCCGGTGGAAAAAATATTGGAGTATACCTCAACGGTTGCTGCTAAAAAGGAAAATTATATTGTCAAAGAAAAATGCCGACCCTTTTGATGAAAATGATGTTAATGGTTCAATTTGCCAGTATGAATGGCTTGTGAAATGGGCTGGTCTTGATTATGATCAGGTTACATGGGAGTTAGACGACGCTTCTTTTATGACTTCATCTAAAGGAAAGAAACTCGTGGACAAGTATGAAAGTCGGCAAAAGAAATCAGATGAACTGTCAACTCCCTTTGAAGCTAATGAGGAGAGTAAAGTTTCCTTTACCGAATTATCAGAGCTATCATCTGGAGATTCACCAGGATTGTATAACCAGCATTTGAGTTATGTGAACAGGCTGCGTATGTGTTGGCACAAAGGTCAGAGTGCTGTTATTGTTGATGATCAAATTGACCAGGAGCGGGTTAGGAAGATGATTTTGTTTATATTATCGTTGAATTGCAATGTGAAAAAGCCTTTTCTCATCATCTCAACTTCTACTGGCCTCTCTGCATGGGAAACCGAATTCTTACATTTGGCACCATCTGCCAATCTTGTAGTTTACAAGGGGAAAGAAGATGTACGCCGTAGGATCAGGGCATTAGATTTTTATAATGAAGATGGTGATATTTTATTTCAAATATTACTATCATTACCTGATAGTATCAGTGAGGACTTACATGCACTAAGATGCATTCCATGGGAAGCAGTAGTAATTGATGAATGCCAGCGACCCATGATTTTAAAACACATTGACAATTTCAATATTCTAGCAGCTGACAAAAGAAGGCTTCTTCTTGTTAGTGGACAAATCAAGGAAGATCGAGATTATATCAAACTGCTTTCATTCCTTAAGTCTGGAAATGATGAGTTATATTACTCATCTGCAAGCATCTCCAATTTGAAGAGTGAATTGGAACAATATACTGTATTGAAATGCAATTCTGACTCCAGCAGGTTTATAGAGTATTGGGTTCCTGCCCTGTTTTCCAGTATGCAGCTTAAGCAGTATTGTTCAATGCTGCTTTCAAACTCACTATTGTTATGCTCTGCCCAAAGGTCTGACTCCGTTGGTGTCCTCCGTGACCTTCTCATCTCAACAAGGAAGTGCTGCAACCATCCTTATCTCCTCAACCAGTCACTGAATAATTTAGTTACTGGAGGTCTGCCCGTTGAAGAGCATTTAGATATTGGAATAAAAGCAAGTGGAAAATTGCAACTTCTTGAAAAGATCCTTTTTGATGCTAAAAGTCGTAAGCTAAGAGTGGTCATATTATTTCAGCCTCCTGAAGGTTCTAGATCAATTGGAGATATTTTGGATGATGTTCTCTGTCATAGATTTGGAAAAGATTGCTATGTACGATATGATAAGGATTACATTCTTTCAAAGAATCAAGCTGCTATGGACACATTTAATGATAGAGAAAGTGGAAAATTTGTTTTTTTGATAGAGAAGAACCGTGGTTGTACTTCAAGCATTAAGCTCTCATCTGTGGATACTATTATATTATTTGACAGTGATTTGGACCCGCAAAATGATCTAAAATGCTTACGAAAAATGGGGATCAGCTCAAACTTCAAACAACTAACAGTTTTGAGATTGTACTCATACTTCACTGTTGAAGAAAAGGTTTTAATGCTTGCAAAAGAAGGTATAGCTCTTGAGAAAAAAACGCCCCTAAACCAGAGTACTATTCATACCCTGCTAAAATGGGGTGCCTCTTATCTGTTCAGTAAGCTTGATGACTTAAATGGAAGTGGCACCTCAGTCTCTGCTTCAGGCATCTCTGATCAGTCAATTCTAAATGATGTAATCTGTGAATTATCATCCAAATTGGTTTGTGATAGTGATGTCACTGATTCTCATGAACAGTCATTCATATCAAAAGTAGAACAGAATGAAGGGGAATATGCACGGAACATTTCATTACTAGGAGAGAGAGATATGAAGAAATTGGGCAATGATACACATACTTTTTCCTGGAGTGATCTCCTCAAAGGAAGGAATCCTCACTGGGATTTTTTGCCTGTTTCGCCTCAAAGGATAAGAAAAACAGTTGAACAGTTTCCTCACACACTAAAAGGATCTGAATATGGAAATGATGCCATTATAAGAAAGAAAAGGACAGAGTCCAAGGATAATGTTTATCCCATAAGAAAGAATGTGTCCAAGGATAATGTAGATCCTAAAGAGAGGAAATTCACCAAGGATAATTTTTACCCAAAAAGAAGGAAACTGTCCAAGGAAATTGTTGATTCCAAATATCTGAAAAAAAAGTGGAAGAACAAGAAGAATCGAAGTGCTGGTGAAAGGAAAGGCAAATTGAATGGAGCAGCTGTAATGACGAAACAAATTCCAAAACAAAAGAAACTGCATGACATGCCCAAGAGCACCAAACTCTTGTCAAAGCCTGATATATCAGGTCTCTGTGATGTTCTACACTTTTCGAAAAATGTCAAGGCTGTCGCCATTAGGATTCTTGAGTATGTATTCGAACATTACAACATTAACTGCCGGGAAGTTTCTACAGTGCAGGCATTTGAAATATCTGTGTGCTGGATAGCAGCTTCTTTGTTAAAACACAAGATTGATAGGAAACATTCAATTGATCTTGCAAAACGCCACTTGAATTTCAAATGCAAGGAGGATGAAGCCATCGATGTTTACAATGTACTGCAGAAGTGTGAGAAAGATTTTTCAAGCTGTTTACAAAATGAACTTTGTGTTGAGGAAAGTAATATCAATGGTGGCTCAGGCTCTTTGACACCTGGGATGCAAAATTCGGTAGAGGAGGAGAATCAAAAGGGTTTTCCGCGTCCTCATGTTTTAAATCTTGTAAAATCTGCCACAAAAGAACATGATCTTCCCAGAAAATCTCCCACAACAGTGCTATTTTCACAAGACCAGATCCATACAGAAAACATTGATAACGAACCTTATATGGCTCATGAAACTTCTACATCTCAAAAAAACCCTGGTAGTTTGTGTGTGGAACTGGAAGCACATGCTACTTCCATAGTATCTGAAGCAGATGAGAGAATAAATGCTGTGAAATCGGTAGCAGCTGAAGTGTCATCCCTTGAGCACTGGGATAAAGCCCCCAATTCAAGTAATGATTTCGATAATGTCAACCCTGTTACAGGTTCTTTGGAAAGACACAGTCACATTGTAAATTCAGATATTACCCAATTTGATGGCAGAGTTTTTATAGATCCTCAAACTTTAATGAATCAATTGATTGACATCGACAATTCTATGAATATGTCAACTCATCTTTCACAACTTCACAATGTTGAGACAGATACTGTAACTTGTGATAGAACTGCTGTTCCTGAGGTCAGACAGCGGTACAGCATAGTGAGTCCTGCATGTGGTGAGTCAACTACTTCAGGGTTTGCTGAGTGTCCTTTACCATATATGCAACTATCACATGCAAACTTGATGCCATTGCCACAGACGTCGTTGTCAGCTAGTCCATCTTTTGTGGAGGACTTATCTCGTACAGTCATGCCTCTAGATAGATTTGTAAATTATAATGGTCGAGATCATAGTAACGTACGCGAGTCTGAACAAAGGTTGCAAGTATTGTATGACCCCGTGGAACTGGTTAATTCTTCCTTTGTTTCGCCTGTGACATCGCGACCCTCCAGTTATGCACCCTGGAATGGAAATGCTACTCATGTTCCTCACGGCATTACTAATCCAGGATATATGAGCAGTGATCCTTTTCAAGCTCATTATGTGACATATCAAATGCCCCATTTTGCAAAACCAGACCCACTACTAATTCAAATGGAGCAAATAAGAAAGATGAATGAAGAAGCCGTCAAGACGCATGAGCAAAAAATATTGCAGCTGCAGTCTGACTACAAAAAGGAGTTTGAGACATTATGTGAAAAACACTGTATGATTCTTCAGAACGTCAATACTGCAGAAGCATTAAAGAATAAGGAACTTGAGACACAGCGTAATATCGTTTTTATGAATATGATGTTAGCTGATGTTTGGGTCCGAAATGATAGTAGTAGGTTGTAA 4548 0.3865 MKAKKRNRVTDDGGNSFSRCVKRLTEEYKGKTRLDPRGKNEKGDGDVVCDKCLLEGTLLCCCGKGCQRRYHPSCLDPPLKFLPIGFWYCIFCVKKKIKLGVHSVSKGVESILDTREVTSKDEVIQREYFVKYQDLAHAHNCWIPEKQMLIEAPKLLKKYEKTQQVVRWKKYWSIPQRLLLKRKIILSKKNADPFDENDVNGSICQYEWLVKWAGLDYDQVTWELDDASFMTSSKGKKLVDKYESRQKKSDELSTPFEANEESKVSFTELSELSSGDSPGLYNQHLSYVNRLRMCWHKGQSAVIVDDQIDQERVRKMILFILSLNCNVKKPFLIISTSTGLSAWETEFLHLAPSANLVVYKGKEDVRRRIRALDFYNEDGDILFQILLSLPDSISEDLHALRCIPWEAVVIDECQRPMILKHIDNFNILAADKRRLLLVSGQIKEDRDYIKLLSFLKSGNDELYYSSASISNLKSELEQYTVLKCNSDSSRFIEYWVPALFSSMQLKQYCSMLLSNSLLLCSAQRSDSVGVLRDLLISTRKCCNHPYLLNQSLNNLVTGGLPVEEHLDIGIKASGKLQLLEKILFDAKSRKLRVVILFQPPEGSRSIGDILDDVLCHRFGKDCYVRYDKDYILSKNQAAMDTFNDRESGKFVFLIEKNRGCTSSIKLSSVDTIILFDSDLDPQNDLKCLRKMGISSNFKQLTVLRLYSYFTVEEKVLMLAKEGIALEKKTPLNQSTIHTLLKWGASYLFSKLDDLNGSGTSVSASGISDQSILNDVICELSSKLVCDSDVTDSHEQSFISKVEQNEGEYARNISLLGERDMKKLGNDTHTFSWSDLLKGRNPHWDFLPVSPQRIRKTVEQFPHTLKGSEYGNDAIIRKKRTESKDNVYPIRKNVSKDNVDPKERKFTKDNFYPKRRKLSKEIVDSKYLKKKWKNKKNRSAGERKGKLNGAAVMTKQIPKQKKLHDMPKSTKLLSKPDISGLCDVLHFSKNVKAVAIRILEYVFEHYNINCREVSTVQAFEISVCWIAASLLKHKIDRKHSIDLAKRHLNFKCKEDEAIDVYNVLQKCEKDFSSCLQNELCVEESNINGGSGSLTPGMQNSVEEENQKGFPRPHVLNLVKSATKEHDLPRKSPTTVLFSQDQIHTENIDNEPYMAHETSTSQKNPGSLCVELEAHATSIVSEADERINAVKSVAAEVSSLEHWDKAPNSSNDFDNVNPVTGSLERHSHIVNSDITQFDGRVFIDPQTLMNQLIDIDNSMNMSTHLSQLHNVETDTVTCDRTAVPEVRQRYSIVSPACGESTTSGFAECPLPYMQLSHANLMPLPQTSLSASPSFVEDLSRTVMPLDRFVNYNGRDHSNVRESEQRLQVLYDPVELVNSSFVSPVTSRPSSYAPWNGNATHVPHGITNPGYMSSDPFQAHYVTYQMPHFAKPDPLLIQMEQIRKMNEEAVKTHEQKILQLQSDYKKEFETLCEKHCMILQNVNTAEALKNKELETQRNIVFMNMMLADVWVRNDSSRL* 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4206 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 729 IPR027417 -
Mal3g4206 1515 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 48 1089 - -
Mal3g4206 1515 SUPERFAMILY Chromo domain-like 201 246 IPR016197 -
Mal3g4206 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 458 IPR027417 -
Mal3g4206 1515 ProSiteProfiles Chromo and chromo shadow domain profile. 179 254 IPR000953 -
Mal3g4206 1515 SMART chromo_7 105 164 IPR000953 -
Mal3g4206 1515 SMART chromo_7 171 247 IPR000953 -
Mal3g4206 1515 SUPERFAMILY Chromo domain-like 65 164 IPR016197 -
Mal3g4206 1515 ProSiteProfiles Zinc finger PHD-type profile. 46 95 IPR019787 -
Mal3g4206 1515 Gene3D - 1429 1509 - -
Mal3g4206 1515 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 1094 1511 - -
Mal3g4206 1515 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 48 1089 - -
Mal3g4206 1515 SMART PHD_3 48 93 IPR001965 -
Mal3g4206 1515 Gene3D - 492 726 IPR027417 -
Mal3g4206 1515 Gene3D - 107 165 - -
Mal3g4206 1515 Pfam Chromo (CHRromatin Organisation MOdifier) domain 108 161 IPR023780 -
Mal3g4206 1515 Gene3D - 174 243 - -
Mal3g4206 1515 Gene3D - 280 491 IPR038718 -
Mal3g4206 1515 ProSiteProfiles Chromo and chromo shadow domain profile. 106 171 IPR000953 -
Mal3g4206 1515 ProSitePatterns Zinc finger PHD-type signature. 49 92 IPR019786 -
Mal3g4206 1515 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 103 IPR013083 -
Mal3g4206 1515 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 1094 1511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4206 Mal-Chr3 121141769 121157587 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mal3g4206 SNF2_N 3e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4206 - K11643 gmx:100813574 1555.42