Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4204 ATGCATGGTTGTTGCTTCCACTATATTTCTCGCCAACGTATGGTGGAGGAGTACCGGAAGCCGGTGGTCCGTCTTGGTGGTGAGACACTGACAATCTCTCAGGTGGCTGCCATTGCCAGACACGACGGTGTAAAGGTGGTGGAGCTGTCAGAATCTGCTAGAGTTGGTGTTAAGGCCAGCAGTGATTGGGTGATGGAGAGTATGAATAAAGGCACCGACAGTTATGGTGTCACCACCGGGTTCGGCGCCACATCGCACCGCCGTACCAAACAAGGTGGTGCTTTGCAGAAAGAACTCATTAGGTTTTTGAATGCCGGAATATTTGGAAATGGAACCGAGTCAAACCAGACACTACCACACACAGCAACAAGAGCTGCCATGCTAGTGCGAATCAACACACTTCTCCAAGGTTATTCAGGAATTAGATTTGAAATCCTAGAAGCCATCACCAAACTTCTTAACAACAACATCACTCCATGTTTACCACTTCGTGGTACAATCACAGCTTCAGGAGATTTGGTCCCTCTATCTTACATTGCTGGGTTGCTAACTGGAAGACCAAATTCCAAAGCTCATGGACCATCTGGAGAAGTACTTAATGCAAAAGAAGCTTTTAAATTGGCTGGAATCAATGCTGAGTTCTTTGAATTACAACCAAAAGAAGGCCTTGCACTTGTTAACGGAACTGCTGTTGGTTCTGGTTTAGCTTCCATTGTTCTCTTTGAGGCTAACATTTTGGCTGTGTTGTCTGAAGTTTTATCAGCAATTTTTGCTGAAGTTATGCAAGGTAAACCTGAATTTACAGATCACTTGACACACAAGTTGAAACACCACCCTGGTCAGATTGAGGCTGCTGCTATTATGGAACACATTTTGGATGGAAGTGCTTATGTCAAAGCAGCTAAGAAGTTGCATGAGATGGATCCTTTGCAGAAACCAAAACAAGATAGATATGCACTTAGAACTTCACCACAATGGCTTGGTCCTTTGATTGAAGTGATTAGATTCTCCACTAAATCAATTGAAAGAGAGATCAACTCTGTCAATGACAACCCTTTGATTGATGTTTCCAGAAACAAGGCTTTGCATGGTGGAAATTTTCAAGGAACTCCTATTGGAGTATCCATGGATAATACACGTTTAGCTCTTGCATCAATTGGCAAACTTATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAACAATGGCTTGCCTTCAAATCTCTCAGCTAGTAGAAATCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCCTATTGTTCTGAGTTACAATATCTTGCAAATCCGGTTACAACCCATGTCCAGAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTTCTAGAAAAACAAAAGAATCCATTGAGATCCTTCAACTCATGTCTTCAACATTCTTGATTGCACTATGTCAAGCAATTGATTTAAGACATTTGGAGGAGAACTTGAAAAACTCAGTCAAGAACACTGTAAGCCAAGTTGCCAAAAAGACCCTTACCATGGGTATGAATGGAGAACTTCATCCTTCCAGATTTTGTGAAAAAGACTTGTTGAAAGTGGTTGATAGGGAGCATGTATTTGCTTATATTGACGATCCTTGTAGCGCTACATACCCATTGAGTCAAAAACTCAGGCAAGTGTTGGTAGATCATGCACTAGTTAATGGAGAAAGTGAGAAGAATTTGAACACATCTATTTTCCAAAAGATTGCAACATTTGAGGAAGAGTTGAAGTCCCTCTTGCCAAAAGAGGTTGAGAGTGCAAGAACTGCATATGAGAGTGGAAATCCAACAATTCCAAACAAGATCAATGGATGCAGATCTTATCCACTTTACAAGTTTGTTAGAGAGGTGTTGCGAACTAGTTTGTTAACTGGAGAAAATGTCATTTCACCGGGTGAGGAGTGTGACAAACTATTCTCAGCTATGTGTCAAGGAAAAACCATTGATCCACTTCTTGAATGCTTGGGAGAGTGGAACGGTGCTCCTCTTTCAATTTGTTAA 2052 0.4157 MHGCCFHYISRQRMVEEYRKPVVRLGGETLTISQVAAIARHDGVKVVELSESARVGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNQTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEVLNAKEAFKLAGINAEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTKESIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTMGMNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEEELKSLLPKEVESARTAYESGNPTIPNKINGCRSYPLYKFVREVLRTSLLTGENVISPGEECDKLFSAMCQGKTIDPLLECLGEWNGAPLSIC* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4204 683 Gene3D Fumarase/aspartase (Central domain) 230 678 - -
Mal3g4204 683 Gene3D - 496 617 IPR023144 -
Mal3g4204 683 SUPERFAMILY L-aspartase-like 8 683 IPR008948 GO:0003824
Mal3g4204 683 CDD PAL-HAL 28 493 IPR001106 -
Mal3g4204 683 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 165 181 IPR022313 GO:0016841
Mal3g4204 683 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 10 683 - -
Mal3g4204 683 Pfam Aromatic amino acid lyase 30 505 IPR001106 -
Mal3g4204 683 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 12 672 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mal3g4204 683 Gene3D - 4 229 IPR024083 -
Mal3g4204 683 PANTHER HISTIDINE AMMONIA-LYASE 10 683 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4204 Mal-Chr3 121086910 121089805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4204 7 683 Monolignol Biosynthesis Gene Families AT2G37040 82.275 0.0 1180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4204 K10775 - gmx:100811101 1210.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4204 3 121086910 121089805 Mal1g2826 1 40082349 40087971 ECH
Mal3g4204 3 121086910 121089805 Mal1g3063 1 45564704 45568650 ECH
Mal3g4204 3 121086910 121089805 Mal3g4204 3 121086910 121089805 ECH