Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4195 ATGCCGCCCTCTCCAGGTATAGGAGCTTGTGCATCTCCAGGTGTTTACGTGCGCGATATCGATTCCTATAGCTACTTTTTTTGGACTCTGGAAGAGAATGAGAAATCCGCTAGGGCTGCTTGGGCTGCTGCTTTTGCTGAAGCTTCCGCTGCTGCGGCTGCTGCTTCTATACTTATCGACACCCCTCTCCGTGCTCCTATTTGCTCCATGTTAGGTCATACAGGGAGTGGCAAAACCGCACTTCTGGATTCTATGCGTCGTAAAGTAGTTCCTTCTCCTCCTCCTCCTGCTAACGCTACTCTAACTAATGCTGCCACATACTTCAAATTGACACCCTATCATCAATCAATCAGAATTCCTGGTTTACTCTTTATCGATACCCCTGGCCAGCCACTCCTCACTCATTTAAAGTCTCAGGCTGTAACCCTATCTGATATCGTAATTCTCGTTCTTGATATTAATAATAATATAGACGACTTTCACCCACAAACTATTGAATCACTCACTCTTTTACAATCCTGGAACAAAAAGTTCATTGTTGCCTTGAATCATATTGACAAGATTTCTGGATGGAAAACATTTCCCAATGCTCCATTCCGTCAATCCTATCACCAACAGTCTTCTCATACTCAAAAAAAGTTTTCTTCTAGCTTCACAAGGATTATTGCTCAGTTCAAACAACATCGGATAAAAGCTGATATGTATCTTAATAACAAAGAATTGGGAGAAACTATCAGCATTGTGCCTACATCTGCAATAAGTGGCGAAGGACTCTCAGATATCAAATCAGAATTGATTAAATTGGCCCAGAAAACTATGGTTTACACACTTACATACCGAGATGAATTGAAGTGTACTGTTTTGGATGTCAGGGTCCTTGAAGGCCGCGGAACCACTATCAATGTTGTTTTAGTTAATGGTGTTCTTCATGTGGGAGATCTAATTGCTGTATCCGGACCTAAGGGCCACATTCTTACCTCCATTCAAGCTTTATGGACAGCTCTTCCACACAACGAACTTGACGCTAAGGCTCATTATGTCTGTCACAAAGAAATCAAAGGTGCGAAGGCTGTCAAGATCATTGCTCAGGGGCTTGAACAGGCTATTGCTGGAACTGATTTACATGTGGTGAAGACTGGGGATGATTCAAAAGATGTTATCGGTTATGAGCAGGTTTCAAAAGATCACTCAAAAGATAAAATCCTAGAGCCATTACTGGAGGTTATTGACTCCCCTCTCCGTGCTCCAATTTGCTCTATGTTGGGTCATTTAGGGAGTGGCAAAACCGCGCTTCTCGATTGTATGCGTCGTAAAGTAGTTCCTTCTCCTCCTCCTGCTAACGCTACTCTAACTAATGCTGCCACACACTTCATATTGACACCCGATCATCCCTCAATCCGACTTCCTGGTTTACTCTTTATTGATACCCCTGGCCAGCAATTCCTCACTCATTTAAAGTCTCAGGCTGTAGCCCAATGTGATATTGCAATCCTCGTTGTTGATATTAATATAGACAACTTTCAGCCACAAACTATTGAATCACTCAGTCTCTTACAAACCTGGAACAAAAAGTTCGTTGTCGCCTTGAATCGGATTGACCAGATTTCTGGATGGAAAACATTTCCCGATGCTCCATTCCGTCAATCATATGACCAGCAGTCTTCTCATGCTCAAACAAAGTTTTCTTCTAGCTTCAGAAAGATTATTGCTGAGTTCAAACAACATGGGATAAAAGCTGATATGTATCTTAATAACAAAGAGCTGGGAGAAACTGTCAGCATTGTGCCTACATCTGCAATAAGTGGTGAAGGACTCTCAGATATCAAATCAGAATTGATTAAATGGACCCAGAAAACTATGGTTCACAGACTTACATACAGGGATGAATTGCAGTGTACTGTTTTGGATGTCAGGGTCATTGAAGGCCGTGGAACCACTATCAATGTTGTTTTAGTTAATGGTGTTCTTCACGTGGGAGATCAAATTGCTGTATGCGGAACTCAGGGCCAAATTGTTACCTCCATTCAAGCTTTATGGACAGCTCTTCCTCACAAGGAACTTGACGCTAAGGCTCATTATGTCCGTCACAAAGAAATCAAAGGTGTGAAGGCTGTCAAGATCATTGCCCAGGGGCTTGAACATGCTATTGCTGGAACTGATTTACATGTTGTGAAGACTGACAATGATTCAAAAGATATTATCGGTCATGAGCAGGATTCAAAAGATGACTCAAAAAAATAA 2241 0.4199 MPPSPGIGACASPGVYVRDIDSYSYFFWTLEENEKSARAAWAAAFAEASAAAAAASILIDTPLRAPICSMLGHTGSGKTALLDSMRRKVVPSPPPPANATLTNAATYFKLTPYHQSIRIPGLLFIDTPGQPLLTHLKSQAVTLSDIVILVLDINNNIDDFHPQTIESLTLLQSWNKKFIVALNHIDKISGWKTFPNAPFRQSYHQQSSHTQKKFSSSFTRIIAQFKQHRIKADMYLNNKELGETISIVPTSAISGEGLSDIKSELIKLAQKTMVYTLTYRDELKCTVLDVRVLEGRGTTINVVLVNGVLHVGDLIAVSGPKGHILTSIQALWTALPHNELDAKAHYVCHKEIKGAKAVKIIAQGLEQAIAGTDLHVVKTGDDSKDVIGYEQVSKDHSKDKILEPLLEVIDSPLRAPICSMLGHLGSGKTALLDCMRRKVVPSPPPANATLTNAATHFILTPDHPSIRLPGLLFIDTPGQQFLTHLKSQAVAQCDIAILVVDINIDNFQPQTIESLSLLQTWNKKFVVALNRIDQISGWKTFPDAPFRQSYDQQSSHAQTKFSSSFRKIIAEFKQHGIKADMYLNNKELGETVSIVPTSAISGEGLSDIKSELIKWTQKTMVHRLTYRDELQCTVLDVRVIEGRGTTINVVLVNGVLHVGDQIAVCGTQGQIVTSIQALWTALPHKELDAKAHYVRHKEIKGVKAVKIIAQGLEHAIAGTDLHVVKTDNDSKDIIGHEQDSKDDSKK* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4195 746 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 413 621 IPR000795 GO:0003924|GO:0005525
Mal3g4195 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 683 IPR027417 -
Mal3g4195 746 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 55 386 - -
Mal3g4195 746 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 410 733 - -
Mal3g4195 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 340 IPR027417 -
Mal3g4195 746 Pfam Elongation factor Tu GTP binding domain 105 269 IPR000795 GO:0003924|GO:0005525
Mal3g4195 746 Pfam Elongation factor Tu GTP binding domain 418 616 IPR000795 GO:0003924|GO:0005525
Mal3g4195 746 CDD aeIF5B_II 629 734 - -
Mal3g4195 746 CDD aeIF5B_II 282 394 - -
Mal3g4195 746 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 410 733 IPR015760 -
Mal3g4195 746 Gene3D - 59 280 IPR027417 -
Mal3g4195 746 Gene3D - 409 627 IPR027417 -
Mal3g4195 746 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 55 386 IPR015760 -
Mal3g4195 746 Gene3D Translation factors 281 398 - -
Mal3g4195 746 Gene3D Translation factors 628 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4195 Mal-Chr3 120850139 120856606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4195 413 729 Eukaryotic Initiation Factors Gene Family AT1G76810 51.988 1.33e-101 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4195 K03243 - ming:122076948 339.732