Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4192 ATGGCAAAAGACATTGAAACCGAACCTCAAGGTGGTGTACCAAACAAGGACTACCAAGACCCACCACCAGCTCCACTCTTTGACACCGCTGAACTTGGCCAGTGGTCCTTCTACAGAGCCCTCATCGCCGAGTTCGTCGCCACTCTCCTCTTCCTCTATGTCACCGTTTTAACCGTCATTGGCTACAGCTCCCAAACCGATCCAGCTCATAGTGGCACCAACTGTGACGGTGTCGGCATCCTCGGTATCGCTTGGGCCTTCGGTGGCATGATTTTTGTCCTAGTCTACTGCACTGCCGGTATATCTGGGGGACACATAAATCCGGCGGTGACATTTGGGCTATTTCTGGCGAGGAAGGTATCATTGATTAGAGCTGTATTATACATGGTGGCTCAATGTTTAGGAGCAATATGTGGTGTTGGGCTAGTAAAGGCTTTTCAGAAAGGTTACTACAATAGGTACAAAGGTGGTGCTAACATGTTAAATGATGGTTATAGTAAAGGAACTGGTTTAGGTGCTGAGATAATTGGAACCTTTGTTCTTGTTTACACCGTTTTCTCTGCCACAGATCCAAAAAGAAGTGCTAGAGACTCTCATGTTCCAGTTTTGGCACCACTTCCAATTGGATTTGCGGTGTTTATGGTTCACCTTGCTACTATTCCTATCACCGGAACTGGTATCAACCCTGCTAGAAGCTTTGGAGCTGCTGTGATTTACAACAATGAGAAAGCATGGGATGACCAATGGATCTTCTGGGTTGGACCCTTTATTGGTGCTGCCATTGCTGCAATCTACCACCAGTTTGTGTTGAGAGCTCAAGCAGCAAAGGCTTTGGGTTCTTTCAGGAGCTCTTCATAA 858 0.4685 MAKDIETEPQGGVPNKDYQDPPPAPLFDTAELGQWSFYRALIAEFVATLLFLYVTVLTVIGYSSQTDPAHSGTNCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGLVKAFQKGYYNRYKGGANMLNDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFIGAAIAAIYHQFVLRAQAAKALGSFRSSS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4192 285 PANTHER AQUAPORIN PIP2-4-RELATED 1 284 - -
Mal3g4192 285 Pfam Major intrinsic protein 32 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 TIGRFAM MIP: MIP family channel proteins 43 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 MobiDBLite consensus disorder prediction 1 21 - -
Mal3g4192 285 CDD MIP 39 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g4192 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 284 IPR034294 -
Mal3g4192 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Mal3g4192 285 SUPERFAMILY Aquaporin-like 32 271 IPR023271 -
Mal3g4192 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4192 Mal-Chr3 120787348 120788980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4192 1 285 Major Intrinsic Protein MIP AT3G53420 82.105 8.25e-174 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4192 K09872 - cit:102608729 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4192 3 120787348 120788980 Mal1g2846 1 40538439 40541807 ECH
Mal3g4192 3 120787348 120788980 Mal3g4192 3 120787348 120788980 ECH
Mal3g4192 3 120787348 120788980 Mal7g2094 7 75004926 75006452 ECH