Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4180 ATGGACAAAAATCCTCATTCAGAAATTCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAAGAACTCATTGTTCACTATCTACAAAACAAAGTTACTTCATCTCCTCTTCCTGCTTCATTCATTGCAGAAATAGATCTTTACAAGTACAATCCATGGGAGCTTCCAAGTAAGGCTTTGTTTGGTGGAGAAGAATGGTATTTCTTTACTCCAAGAGACAGAAAGTATCCCAAAGGATTGAGGCCTAATAGAGCAGCTGGTGCAGGTTATTGGAAAGCAACTGGAACTGACAAACCTATTCTTACTTCATGTGGGTTGAAAAGCATTGGAGTGAAGAAAGCTCTTGTGTTCTACAAGGGACGTCCACCAAAAGGATCTAAAACTGAGTGGATCATGCATGAGTATAGGTTGCATGATTCAATGATCTCAAATTCCAAGCATAGTGGCTCTATGAGACTGGATGAGTGGGTGTTATGTCGCGTTCGACAAAAAACGGGCAGCCCAAGAAGCAGTTGGGAAGATTCAAATGAACTTAGCTTTGAATCAACAAGTCAATTTCAGCAAATGACTGTGAACTCAAATCCTGAACCAGTCAAAAACTATGTGCAGAATGAATATCCAATGTTACCTTATATTTTGGCTTCTAAGAGTGTTCTGCCTAGTTCCATCGGTATGACCTCAGACAATGTAAAAATACAAGCTTCATCTTATGATGACAACTTAAACATGATAGGAGCACAGTTCTTATCATCTGCAACTGAGGGATTGTTTAATAATCCGCTGAAGAGAAAAGCAGTCGAAGATAATATTGGCATGGACTTTTATGCTGTCCTCAATAAAAATCTAAGCAGAGAAGTTGATGATGGGAAGCAAAGACTTGAAAAAGATTTAAGCAAAGGGTATAATAATTTCTACAACTTTGATCAGTGGACTTCAATCATACAACCTCAAGAGCTTAATAGCTGA 969 0.387 MDKNPHSEIQLPPGFRFHPSDEELIVHYLQNKVTSSPLPASFIAEIDLYKYNPWELPSKALFGGEEWYFFTPRDRKYPKGLRPNRAAGAGYWKATGTDKPILTSCGLKSIGVKKALVFYKGRPPKGSKTEWIMHEYRLHDSMISNSKHSGSMRLDEWVLCRVRQKTGSPRSSWEDSNELSFESTSQFQQMTVNSNPEPVKNYVQNEYPMLPYILASKSVLPSSIGMTSDNVKIQASSYDDNLNMIGAQFLSSATEGLFNNPLKRKAVEDNIGMDFYAVLNKNLSREVDDGKQRLEKDLSKGYNNFYNFDQWTSIIQPQELNS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4180 322 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Mal3g4180 322 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Mal3g4180 322 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Mal3g4180 322 PANTHER NAC TRANSCRIPTION FACTOR 56 2 294 - -
Mal3g4180 322 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Mal3g4180 322 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4180 Mal-Chr3 120585690 120586954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4180 7 170 NAC Transcription Factor Family AT1G69490 66.463 4.85e-81 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g4180 NAM 4.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4180 - - cam:101491216 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4180 3 120585690 120586954 Mal3g4180 3 120585690 120586954 ECH