Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4175 ATGGCCGATAAAGTCCCTCCGAATGCTGGATCTCAAGGGTTCAACCCAGGCTTAATAGTTCTCCTGGTTATTGGTGGCTTGCTGTTGACATTCCTCATTGGAAATTATGCGCTTTACGTTTATGCACAGAAGACCCTCCCTGCTAGAAAAAAGAAGCCAGTCTCAAAAAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGAGTCTCTGCACCTGGAGAGTAG 222 0.455 MADKVPPNAGSQGFNPGLIVLLVIGGLLLTFLIGNYALYVYAQKTLPARKKKPVSKKKMKKERLKQGVSAPGE* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4175 73 PANTHER DNA-BINDING PROTEIN S1FA2 7 73 IPR006779 GO:0003677|GO:0005634|GO:0006355
Mal3g4175 73 MobiDBLite consensus disorder prediction 50 73 - -
Mal3g4175 73 Pfam DNA binding protein S1FA 10 73 IPR006779 GO:0003677|GO:0005634|GO:0006355
Mal3g4175 73 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 7 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4175 Mal-Chr3 120503595 120504992 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Mal3g4175 S1FA 3.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4175 - - gmx:100500059 108.227