Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4174 ATGGCCGATGATGACTTTAAAGTTCCTCCTTCCTTCGATCGCATGAAAGCTGGTGGATCTCAAGGGTTGAATCCAGGCTTAATAGTTCTCCTGGTTATTGGTGGCTTGCTATTGACATTCCTCATTGGAAATTATGCGCTCTACGTTTATGCACACAAGACCCTCCCTCCTAGAAAAAAGAAGCCTGTCTCTAAAAAGAAGATGAAAAAGGAGAGACTCAAGCAAGGAGTTTCTGCACCTGGAGAGTAG 249 0.4418 MADDDFKVPPSFDRMKAGGSQGLNPGLIVLLVIGGLLLTFLIGNYALYVYAHKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4174 82 Pfam DNA binding protein S1FA 20 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Mal3g4174 82 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 8 82 - -
Mal3g4174 82 MobiDBLite consensus disorder prediction 57 72 - -
Mal3g4174 82 MobiDBLite consensus disorder prediction 57 82 - -
Mal3g4174 82 PANTHER DNA-BINDING PROTEIN S1FA2 8 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4174 Mal-Chr3 120489315 120489957 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Mal3g4174 S1FA 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4174 - - sspl:121787800 118.242