Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4166 ATGGGGAAGAAGGGAAATTGGTTTTCTACAGTGAAGAAAGCTCTCAGCCCTGACTCAAAGAAATCAAGTAAATCGAAAAAGAAATGGTTTGGGAAGCAAAAATTACAGACTTCAGACCCCTCTTTAGAAACAGACACATCACCGCCTCTTCCTCCGCCAGAAGATATTAAATTAACTGATATTGAAAATCAAAACAGTCACCATCATGTTGCTGAAATTACAACTGTCGTGGATGCCGAGGAACCTGTTCGTTCTGTTCAGACAGCAGTTGTTAAGACTGAAGCTGCTGCAGTTTCTCGTTTTGCCGGTAAACCAAAGGATGAAGTGGCAGCAATCAAGATTCAAACAGCTTTCCGAGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGAGGGCTGGTCAGATTGAAAACATTGATGGAAGGGCCAATTGTAAAACGCCAAGCCATGAGTACCCTCCGCTCAATGCAGACGTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGGTCAGAATGTTAGAGGAGAATCAGGCTTTGCAGAGACAACTCTTACAGAAGCATGCAAGGGAGCTTGAGACCATGCGGATTGGGGAGGAATGGGATGATAGCCTACAATCGAAAGAGCAAATCGAAGCCAAATTAATGAGCAAGTATGAGGCTACTATGAGAAGAGAAAGAGCACTGGCTTATGCATTCACTCATCAGCAAAATTCGAAGAACTCATCTAGATCAATGAATCCAATGTTCCTGGATCCAACCAATCCTACGTGGGGTTGGAGCTGGCTAGAGCGATGGATGGCTGCCCGACCTTGGGAGAGCCGCGGCGTTATCGATAAAGAACTGAATGACCATTCATCTGTTAAAAGTTCAAGCCGCAGCATTACTGGTGGAGAAATCAGCAAATCATTTGCCCGTTTCCAGCTCAATTCTGAAATACATTCTCCAGTAGCCAGCCAAAATCTTGGCTCACCCAGCTTCCAGTCCAATTCAACTCCTACTAAGCCAGCTTCTGCAGGAGTTGCCAGGAAACTGAAGAAGGCGAGTCCAAAGGGAAGCTGGGTTATGGATGATGACTCCAAAAGCATGGCAAGTGTACAGTCAGATCGGTTCCGTAGGCACTCTATTGCCGGGTCATCAGTTAGAGATGATGAGAGTCTTGCTAGCTCTCCATCAGTTCCAAGTTATATGGTGCCGACTCAATCGGCAAAAGCTAGGTTGAGGACACAAAGTCAAAGTCCATTAGCAAAAGAAAATGGCAAACAAGAAAAGGGGTCCTTTGGAACTGCAAAGAAGCGCCTTTCTTTCCCGGCTTCACCTGCTAGGCCAAGGCGTCATTCAGGTCCACCGAAGGTAGAAACCGCCATAAATGCAGAGTTAACTGTGAACAATGGTGTTGCCAGTTGA 1407 0.4591 MGKKGNWFSTVKKALSPDSKKSSKSKKKWFGKQKLQTSDPSLETDTSPPLPPPEDIKLTDIENQNSHHHVAEITTVVDAEEPVRSVQTAVVKTEAAAVSRFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGPIVKRQAMSTLRSMQTLARVQSQIRSRRVRMLEENQALQRQLLQKHARELETMRIGEEWDDSLQSKEQIEAKLMSKYEATMRRERALAYAFTHQQNSKNSSRSMNPMFLDPTNPTWGWSWLERWMAARPWESRGVIDKELNDHSSVKSSSRSITGGEISKSFARFQLNSEIHSPVASQNLGSPSFQSNSTPTKPASAGVARKLKKASPKGSWVMDDDSKSMASVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKARLRTQSQSPLAKENGKQEKGSFGTAKKRLSFPASPARPRRHSGPPKVETAINAELTVNNGVAS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4166 468 PANTHER IQ-DOMAIN 5-RELATED 1 464 - -
Mal3g4166 468 MobiDBLite consensus disorder prediction 382 419 - -
Mal3g4166 468 Gene3D - 83 132 - -
Mal3g4166 468 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Mal3g4166 468 SMART iq_5 106 128 IPR000048 GO:0005515
Mal3g4166 468 Pfam IQ calmodulin-binding motif 110 128 IPR000048 GO:0005515
Mal3g4166 468 MobiDBLite consensus disorder prediction 317 337 - -
Mal3g4166 468 MobiDBLite consensus disorder prediction 1 54 - -
Mal3g4166 468 Pfam Protein of unknown function (DUF4005) 381 445 IPR025064 -
Mal3g4166 468 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 464 - -
Mal3g4166 468 MobiDBLite consensus disorder prediction 317 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4166 Mal-Chr3 120396078 120398872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4166 1 468 IQD Protein Family AT5G03040 52.556 6.73e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4166 - - gmx:100800080 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4166 3 120396078 120398872 Mal3g4166 3 120396078 120398872 ECH
Mal3g4166 3 120396078 120398872 Mal1g3012 1 44018418 44022042 PCT