Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4157 ATGCACCTAACGGCGGAAGAGACGACGGAGCAGATGATCCGATATGGTTCCGGTTCATCATCTTCCATGGATTCATTCGAGTTAAAGGATTTTTACTTTCCTCAACAACTCTTCACTTTTGAAGAAACCTGGCTCAATCTCACTGCTTCTCTTTTTTCCTTCTTTTCTTCTCCCATAGGCCAAAACATCGTTTTTCAGGTGAAAAATGAATATGGAAACTATGTATTGTCACTTGATCTTCAGCAGTTCAAAAATATGTGTCATGTTGTGGAATTTTATGAAATGTTATCGGAGAAACCTAAAATTGCTCTCTTATGCATGAGTGCTGCTGTTCATAAGGTTTTGCTTTCTAAATGGGATAATGACAAGCCGGAGCTTGCTTCAAAAGTAGACATCCGTCTTCATAACTGTCCTGAAAACACGATTGCGCTGAAGAACTTAAAAGCAGCTTACATTGACAAGCTTGTCTCAGTGCGTGGTACCGCTGTGAAAGCCAGCACCGTCAGGCCTCTAGTGGTAGAAATGAGTTTTGAATGCACTAAGTGCAAACAAACTATTACACGTTTATTTCCTGATGGAAAATTTTCACCGCCATCAATTTGCAATTTGAATGGCTGCAAAAGCAAAATCTTCAATCCATTGCGATCTACTGCTCAAACTATTGATTTTCAGAAAATAAGGGTTCAAGAATTATTAAAACATGAAGATCATGAGGAAGGACGAGTGCCTCGAACAGTGGAATGTGAACTTACCCAAGATCTTGTTGATTCGTGTATTCCTGGGGATGTGGTGACGGTTACCGGAATTATCAGAGGAATTAACAATTACATGGATATTGGAGGAGGGAAGTCAAAGAACAGAAACCAAGGATTTTACTATTTGTATCTTGAAGCTGTATCCATAATGAATTCGAAGTCACAGTCCATATCTGATGATTCACAAGACTCTAATGCCAAAGCTAGACCAACTGAGCTGTTTGATTTGTTTTCGTTTTCTTCAAAGGATTTAGAATTTGTTGTCAAATTCGCAGAGGAGCATGGTTCAGATTTATTTCGGCAAATCCTTCACTCTATATGCCCTTCCATCTATGGGCACGAGCTTGTTAAAGCTGGGATAACTCTAGCATTATTTGGTGGTGTGCGAAGGCATTCTATGGATCAGAATAAGGTTCCTGTGAGGGGAGATATTCATGTCTTAATTGTAGGTGATCCTGGTCTAGGCAAGAGCCAGTTGTTACAAGCAGCAGCAGCTGTTTCTCCACGTGGTATCTATGTCTGTGGTAACGCCACAACCAAAGCTGGCCTCACAGTAGCTGTTGTGAAGGATCCTATGACAAATGACTATGCTTTTGAGGCGGGTGCTATGGTGCTGGCTGACAGTGGATTGTGCTGTATTGATGAGTTTGATAAAATGACCTCAGAGCATCAGGCTTTACTGGAGGCAATGGAGCAACAGTGCGTCTCTATTGCAAAGGCGGGATTGGTAGCAAGTTTATCATCCCGGACTTCTGTCTTAGCGGCTGCAAACCCTGTTGGTGGTCATTATAACCGGGCAAAAACTGTAAATGAAAATTTAAAAATGAATGCTGCACTATTGTCCCGTTTTGATTTAATTTTCATATTGCTGGACAAGCCTGATGAACTTTTGGACAAGCGAGTCTCAGAGCACATTATGTCACTTCATTCTGGGAGCGGGCAACACTCACAGGCATCTAAAAAGCGACGTGGAGATCCACCTTCTGATTCAAGAGCTTCTGCATCACAGAATGTTGAAGGGGTAGATTTGAGTGTAAGATCTGGTTCTTTAATTTCAAGGTTGAAACTTGACAGACGAAGAGACAGCGATTTTGTTCCATTACCTGGTCAACTTCTTCGCAAATACATTGCTTATGCCAGGAGTTATGTCTTTCCTAGGATGTCCAAGCCAGCAGCAGATATCATACAAAAGTTTTACCTAAAACTCAGAGATCATAACGTTTCGGCTGATAGTACTCCTATAACAGCAAGGCAGCTGGAAAGTCTAGTAAGGCTAGCTGAAGCTCGTGCTCGGCTGGACTTGAGAGTAGAGATAACGGCCCAGGATGCAATGGATGTTGTTGAAATCATGAAGGAATCCCTGTATGATAAATATATTGATGAGCATGGGGTCGTTGATTTTGGTCGAAGTGGGGGGATGAGTCAACAGAAAGAAGCAAAACGCTTTCTAAATGCCCTCAATAAGCAATCAGAGCTGGAACAGAAAGATTGCTTTTCAGTATCTGAAATATACAGTCTGGCAGATAGGATTTCCTTGAAAGTACCTGATATAGACACTTTCATCGATAATTTAAACAGCGTTGGTTATCTACTCAAAAAAGGACCGAAGGCATACCAGGTGTTATCCTCTTCTTACGCGAGGAGCCAATCGTCTAGGTCAAGGGGCTGA 2424 0.4171 MHLTAEETTEQMIRYGSGSSSSMDSFELKDFYFPQQLFTFEETWLNLTASLFSFFSSPIGQNIVFQVKNEYGNYVLSLDLQQFKNMCHVVEFYEMLSEKPKIALLCMSAAVHKVLLSKWDNDKPELASKVDIRLHNCPENTIALKNLKAAYIDKLVSVRGTAVKASTVRPLVVEMSFECTKCKQTITRLFPDGKFSPPSICNLNGCKSKIFNPLRSTAQTIDFQKIRVQELLKHEDHEEGRVPRTVECELTQDLVDSCIPGDVVTVTGIIRGINNYMDIGGGKSKNRNQGFYYLYLEAVSIMNSKSQSISDDSQDSNAKARPTELFDLFSFSSKDLEFVVKFAEEHGSDLFRQILHSICPSIYGHELVKAGITLALFGGVRRHSMDQNKVPVRGDIHVLIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPMTNDYAFEAGAMVLADSGLCCIDEFDKMTSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMNAALLSRFDLIFILLDKPDELLDKRVSEHIMSLHSGSGQHSQASKKRRGDPPSDSRASASQNVEGVDLSVRSGSLISRLKLDRRRDSDFVPLPGQLLRKYIAYARSYVFPRMSKPAADIIQKFYLKLRDHNVSADSTPITARQLESLVRLAEARARLDLRVEITAQDAMDVVEIMKESLYDKYIDEHGVVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVSEIYSLADRISLKVPDIDTFIDNLNSVGYLLKKGPKAYQVLSSSYARSQSSRSRG* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4157 807 SMART mcm 140 707 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 Gene3D - 144 273 IPR012340 -
Mal3g4157 807 Pfam MCM AAA-lid domain 623 706 IPR041562 -
Mal3g4157 807 PANTHER DNA HELICASE MCM8 21 802 - -
Mal3g4157 807 Pfam MCM P-loop domain 348 561 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 ProSiteProfiles MCM family domain profile. 350 557 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 712 IPR027417 -
Mal3g4157 807 CDD MCM8 354 705 - -
Mal3g4157 807 Gene3D - 328 715 IPR027417 -
Mal3g4157 807 SMART AAA_5 394 546 IPR003593 -
Mal3g4157 807 MobiDBLite consensus disorder prediction 560 590 - -
Mal3g4157 807 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 21 802 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 PRINTS Mini-chromosome maintenance (MCM) protein family signature 504 516 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 PRINTS Mini-chromosome maintenance (MCM) protein family signature 531 539 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 PRINTS Mini-chromosome maintenance (MCM) protein family signature 393 408 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 PRINTS Mini-chromosome maintenance (MCM) protein family signature 453 467 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 PRINTS Mini-chromosome maintenance (MCM) protein family signature 480 493 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal3g4157 807 SUPERFAMILY Nucleic acid-binding proteins 67 274 IPR012340 -
Mal3g4157 807 Gene3D - 171 221 - -
Mal3g4157 807 Pfam MCM OB domain 144 272 IPR033762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4157 Mal-Chr3 120305945 120313732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4157 15 793 Core DNA Replication Machinery Family AT3G09660 71.302 0.0 1153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4157 K10737 - gmx:100784549 1306.58