Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4154 ATGGCGCTCCCAGAAAGTAAATCTAGGACGCGCTGTTCGTCGCTCCAGAAGTTTTTGCTTATGGTTCATGATGCGGATGAGAAATCGATTAGGGTTGCTAGGGCTGCTAGGTTGGTGGCTTCTACTTCTGCTTCTCCTCGTGCTCCAATTTGCTGTATCTTGGGTCATATAGGGAGTGGCAAAACCACGTTGCTGGACTCTATCCTAGGAGGAGGAGGAGGAGGACGCACCGATTTTACTCTAAGTAATGCTGCCACATATTTGGAAAGTATACCCGATCATCCAGAATTCAATCTTCCTGGTATACTCTTTATCGATACCCCTGGCCAATCACTCCTCACTCAATCAAGATCTCAGGCTGTAGCCCTATGTGATATTGCAATCCTCGTTGCTGACATTAATATACCCTTACAACCACAAACTATTGAATCACTCCATCTTTTACAAACCTGGAACAAAAACTTCATTGTCGCCTTGACTCAGATTGACAAGATTTCTGGATGGAAAACATTTCCCAATGCTTCGTTCAATCAATCATATGGCCAGCAGTCTAATGATGCTTACATAATGTTTTCTACTAGGTTCAGCCTGATTATTGATCAGTTCATACATCATGGGATAAAATCTGATTTATATCTTCATAACAACAATGAATTCGCAAAAATTGTCAGCCTTGTGCCTACATCTGCAATAAGCGGTGAAGGACTCTCAGATATCAAATCAGAATTGATTAAGTGGACCCAGCAAAACATGTTTGACAAACTTATTACATACACGCAAGAATTGCAGTGTACTGTTTTGGATGTCAAGGTCCTTGAAGGCCGTGGAACTACTATCAATGTTGTTTTAGTTAATGGCACTCTTCATGTAGGAGATCAAATTGTTGTATGCGGAACTCAGGGCCAAATTGTTACCTCAATTCAAGCTTTATGGACAGCTCCTCCACACAAGGAACTTGACGCCGAGGCTCATTATCTCTGTCACAAAGAAATCAAAGGTGTGAAGGCTGTCAAGATCATTGCCCAGATGACGTGGCATAAATCAACACTCCCCCTCATTTTGTAG 1065 0.4216 MALPESKSRTRCSSLQKFLLMVHDADEKSIRVARAARLVASTSASPRAPICCILGHIGSGKTTLLDSILGGGGGGRTDFTLSNAATYLESIPDHPEFNLPGILFIDTPGQSLLTQSRSQAVALCDIAILVADINIPLQPQTIESLHLLQTWNKNFIVALTQIDKISGWKTFPNASFNQSYGQQSNDAYIMFSTRFSLIIDQFIHHGIKSDLYLHNNNEFAKIVSLVPTSAISGEGLSDIKSELIKWTQQNMFDKLITYTQELQCTVLDVKVLEGRGTTINVVLVNGTLHVGDQIVVCGTQGQIVTSIQALWTAPPHKELDAEAHYLCHKEIKGVKAVKIIAQMTWHKSTLPLIL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4154 354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 313 IPR027417 -
Mal3g4154 354 TIGRFAM small_GTP: small GTP-binding protein domain 51 181 IPR005225 GO:0005525
Mal3g4154 354 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 39 342 IPR015760 -
Mal3g4154 354 Gene3D - 41 258 IPR027417 -
Mal3g4154 354 Gene3D Translation factors 260 348 - -
Mal3g4154 354 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 46 251 IPR000795 GO:0003924|GO:0005525
Mal3g4154 354 Pfam Elongation factor Tu GTP binding domain 80 247 IPR000795 GO:0003924|GO:0005525
Mal3g4154 354 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 39 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4154 Mal-Chr3 120294958 120300007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4154 2 346 Eukaryotic Initiation Factors Gene Family AT1G76810 45.506 9.79e-89 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4154 K03243 - sind:105158906 281.182