Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4151 ATGTTGGATCTCAATCTCAACGCTGATTCTCTTCCACTCTCCGCCACCGCTCAAATGGAAAGCTCCGGCAGCTTTGATTCCTCCGTCGTCAACGCCGCCGACACTGAAGATTCCTCCTCTTACGGAGATGCATACGCTTACAACTTCGCCATACTCAACACCAACGCTTCCATCGACAACGGCACTATCTCCGGTGAGCTTCAACACTCCGGCGCCGGCGAAGCCGGTGTACGGACAATTCAGCTTTTTCCGGAAAACGAATCAGGATTAATCTCGCCGTCTGAGAGTAGAGGATGGATGAATTTCGCGTCGGATCATCACGGTGGCGTGCCGGAGCAGACTGTTGTTGCTCCACGGCCACAGCAGGTGAAGAAGAGTCGCCGTGGACCGAGGTCGCGAAGCTCGCAGTATCGTGGTGTTACTTTCTACCGGAGAACTGGACGATGGGAATCGCATATTTGGGATTGTGGAAAACAAGTTTACTTAGGTGGATTTGATACTGCGCATGCTGCGGCAAGAGCATATGATCGAGCTGCGATTAAGTTCCGTGGTGTTGATGCGGATATTAATTTCAATGTTAGCGATTATGATGAAGATATAAAGCAGATGAATAATTTTACCAAGGAAGAGTTTGTGCATATTCTGCGTAGACAGAGCACCGGTTTCTCAAGGGGAAGTTCCAAATACAGAGGAGTTACTCTGCATAAATGTGGAAGATGGGAAGCTCGTATGGGACAGTTTCTTGGGAAGAAAGCATATGATAAGGCTGCTATAAAATGCAATGGAAGAGAAGCAGTTACAAATTTTGAGGCTAGTTCTTATGAAGGCGAGTTAATTTCCCAGGCTGATAACAATGATATGAAGCAGAATCTTGATCTGAACTTGGCTATAGCTCCTCCCTCCAACTCTGATGTTCAAATGATGAACATGCACTACGATGCAAGTGGTTTACAAGTTCAGCGTAACTGGGATGATATGCCTGTTGATAAGAGTGTAATGTTTGAGGACTCTGGGTCAAGATCACTCAATGTTCAGTCATCTTATGGCTTTTCCATAGCATCTGAGAATCAACCTCCAGTCTGGAGTGGTACCAATTACTTTCCCGTGTGTAAGGAAAGAGCAATAGAGAATAGGATGGAATCTGCTCCCGTTCCAAATTGGGCATGGCAACTCCAAAGTCCATATAATAATGGGTCAACTTTGATTCCACCTAATTTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACAACAGCTGCGGATAGTCAAATTCATTTTCCAAACATGACATACCTACAACACCCTCATTTTCCTACTCCAATGACTAACTCCAGCACCATACCCCCTTTCTACTGCAGGAGCTGA 1365 0.4601 MLDLNLNADSLPLSATAQMESSGSFDSSVVNAADTEDSSSYGDAYAYNFAILNTNASIDNGTISGELQHSGAGEAGVRTIQLFPENESGLISPSESRGWMNFASDHHGGVPEQTVVAPRPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMNNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFEASSYEGELISQADNNDMKQNLDLNLAIAPPSNSDVQMMNMHYDASGLQVQRNWDDMPVDKSVMFEDSGSRSLNVQSSYGFSIASENQPPVWSGTNYFPVCKERAIENRMESAPVPNWAWQLQSPYNNGSTLIPPNFSAAASSGFPSTTAADSQIHFPNMTYLQHPHFPTPMTNSSTIPPFYCRS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4151 454 Gene3D AP2/ERF domain 135 194 IPR036955 GO:0003700|GO:0006355
Mal3g4151 454 Gene3D AP2/ERF domain 227 271 IPR036955 GO:0003700|GO:0006355
Mal3g4151 454 CDD AP2 136 194 IPR001471 GO:0003700|GO:0006355
Mal3g4151 454 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 426 - -
Mal3g4151 454 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Mal3g4151 454 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 426 - -
Mal3g4151 454 SUPERFAMILY DNA-binding domain 227 271 IPR016177 GO:0003677
Mal3g4151 454 SUPERFAMILY DNA-binding domain 135 194 IPR016177 GO:0003677
Mal3g4151 454 MobiDBLite consensus disorder prediction 109 136 - -
Mal3g4151 454 CDD AP2 227 272 IPR001471 GO:0003700|GO:0006355
Mal3g4151 454 SMART rav1_2 228 276 IPR001471 GO:0003700|GO:0006355
Mal3g4151 454 SMART rav1_2 136 198 IPR001471 GO:0003700|GO:0006355
Mal3g4151 454 ProSiteProfiles AP2/ERF domain profile. 136 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4151 Mal-Chr3 120237921 120240552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4151 115 310 AP2-EREBP Transcription Factor Family AT4G36920 71.028 9.78e-82 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g4151 AP2 6.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4151 K09284 - gmx:100797238 608.986