Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4145 ATGATGCATATTGAAGAAGCAGAAAGAGTAGTTGTTGCCAAACCTGTTGCTTCAAGGCCTACTTGTTCTTCATACAAATCTTTCTCAGAGCTTCTAGCAGGTGCAATCAATTCCACTCCTCCAATTGCATCTTCTCAAACTACAATTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCAGCAGTGAATCTCTCCCCTTCTGAGGCTGATATTTTTGGAGGTGCACTTAGCAATTCTTCTGACATGGATCCCAAACCTGACACCAATCAATCTCTTATTTATAAACCAATGGCAAAATTCGTGTCACCGACAACTCTCTCTCTCTTGGCAAACATGGGAATTTGCAGTAATAGTCAGCAACAACCACAGCAATCAATGGATACCAATCTTCAGCATCTAAACCATGAAAACTTTAGAGCTAACACGAGCTCAAAATTTCATCAGAACATTACCCTTCCTACAGAAACATATCAGGCCACAGAATCTTGTAAGGTGGCACCACAGAACATGGAGGAGGACCAAAAAGCTTTACCATCCACAAATAATGCTGATAGACCTTCATATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTATTACAAGTGCACGCATCCTAATTGTCCGGTTAAAAAGAAAGTTGAAAGATCATTTGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATGGAAAGCCGCAGCCTCAAAAGCGAAATGCGGGAGGGACACAAGGATCGGGAATGATTTCTGATGGAATGGCCCAAGATATGTGGAATAATAATCAGAATGAAAGGAATGAAGGAAGAGTGGAGAATCATGTCAAAGCTTCACAGCCAAATGATTCTGCTCTAGAAAATTCATGTGGTTTAAGTGGAGAATGTGATGAAGGAAGCAAAGGATTTGAGGCAGAGGAGAATGACCCTAGAAGTAAAAGAAGGAAAAATGAGAATCAATCCAACGAAGCGGCAGTATCAGAGGAAAGCTTAGTAGAGCCACGCATTGTGATGCAAAGTTCTGTGGACTCTGAAATCCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAATATCAACTGTAACGTTCGCAAGCATGTGGAGAGATCAATAGATGATCCAAAATCATTTGTGACTACATATGAAGGAAAACACAACCATGAGATGCCACTGAAAAAGATTTAA 1272 0.4072 MMHIEEAERVVVAKPVASRPTCSSYKSFSELLAGAINSTPPIASSQTTISAIRPKTVRFKPAVNLSPSEADIFGGALSNSSDMDPKPDTNQSLIYKPMAKFVSPTTLSLLANMGICSNSQQQPQQSMDTNLQHLNHENFRANTSSKFHQNITLPTETYQATESCKVAPQNMEEDQKALPSTNNADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGEIAEIVYKGEHNHGKPQPQKRNAGGTQGSGMISDGMAQDMWNNNQNERNEGRVENHVKASQPNDSALENSCGLSGECDEGSKGFEAEENDPRSKRRKNENQSNEAAVSEESLVEPRIVMQSSVDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNINCNVRKHVERSIDDPKSFVTTYEGKHNHEMPLKKI* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4145 423 MobiDBLite consensus disorder prediction 250 279 - -
Mal3g4145 423 ProSiteProfiles WRKY domain profile. 354 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 421 IPR044810 GO:0003700
Mal3g4145 423 SUPERFAMILY WRKY DNA-binding domain 353 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 MobiDBLite consensus disorder prediction 239 342 - -
Mal3g4145 423 SMART WRKY_cls 359 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 SMART WRKY_cls 188 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 SUPERFAMILY WRKY DNA-binding domain 187 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 MobiDBLite consensus disorder prediction 171 192 - -
Mal3g4145 423 Pfam WRKY DNA -binding domain 190 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 Pfam WRKY DNA -binding domain 361 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 MobiDBLite consensus disorder prediction 171 188 - -
Mal3g4145 423 Gene3D WRKY domain 344 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 Gene3D WRKY domain 173 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 ProSiteProfiles WRKY domain profile. 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g4145 423 PANTHER OS12G0507300 PROTEIN 19 421 - -
Mal3g4145 423 MobiDBLite consensus disorder prediction 311 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4145 Mal-Chr3 120176927 120179833 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4145 84 420 WRKY Transcription Factor Family AT2G37260 45.777 2.10e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g4145 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4145 - - gmx:100794069 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4145 3 120176927 120179833 Mal1g2545 1 35193313 35196852 PCT