Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4095 ATGGAGGAGGAGGAGGGTGCGAATAGTAATAATAATAATAATAATAATAATAATAATAGGGTTTCGTCGAACCCATCTTCTTACTGGTTGGATGCCTGTGAGGATATCTCTATCTCTTGTGATGATTTCATTCATGATTTTCAACATCATGTTGTTGATGTTGATGTTATTGATGATGATTCTCAACTACAACAGCAACAACAACCCAATGACTTTTTTGGTGGTATTGATCGAATCTTGGACAGTATCAAGAACGGTGCTGGCCTCCCTCCTCCTCCTCATTCCGAACCATCACCTCTCAATGTCAATCAACAACCTCTTCTTCTTACTCATCTTCAACCTGATGATGATGATGAAGAAGAAAGGTTCAACAAAAGGGCTCGCCTCAACGACTCCAACAATGAGAGGAGAATTAATCATCAATCCAACAACAACAGCAAGGACATGTTCGAGAGGTGTTTCAATAATAATAATAATAGGAAGAAGAGGCCTAGGGATAATAGGAATAATCAAAATTTCAAGAAAAGGGATCATTCTTTTAACAGAGATGTCAAGGGTTACTGGGAGAGGGATAAGTCTTCTCCTGCTTCCAATGAATTGGTCTTTCGCTCTGGAACTTGGGAACCCAATCATATCCGACAAGACAAAATGCCCATTGGCGAAACCAATAACAATTCCCAGGAGGCTTCTGCCAAGGACAGGGTTCCTGAAGAAAAAGCTAGACAGTATCAGCTCGATGTTCTTGAACAGGCAAAGACCAGAAATACCATAGCTTTTCTAGAAACTGGAGCTGGTAAAACCCTCATTGCCGTTCTTCTCATCAAGTCTATACACCAAACTTTACATCACCAAAATAAGAAAATGCTTGCAGTGTTTTTGGTCCCTAAAGTTCCACTTGTTTACCAGCAAGCTGAGGTCATCCGTGAGCGCACCGGATATCAAGTGGGGCACTATTGTGGAGAAATGGGGCAGGATTTCTGGGATTCTCGAAGGTGGCAGCGTGAATTCGACACTAAACATGTTTTAGTCATGACTGCTCAAATACTTTTGAACATTTTGAGGCATAGCATCATAAAAATGGAAGCAATCAATCTCCTGATTCTGGACGAGTGCCATCATGCTGTGAAGAAACACCCATATTCGCTGGTGATGTCTGAGTTCTACCATACAACGCCCAAAGAAAAGAGGCCATCTGTATTTGGAATGACTGCTTCTCCTGTTAACTTAAAGGGCGTTTCCAGCCAAGTAGATTGCGCAATAAAAATTCGTAATCTTGAAAGTAAGCTAGACTCAATAGTTTGTACCATTAAAGATCGTAATGAGCTAGAGAAACATGTGCCTATGCCTTCCGAAATTGTGGTGGAGTATGATAAAGCGGCCAGTCTATGTTATTTACATGAGCAAATAAAGCAAATGGAGACTGAAGTTGAGGAAGCAGCAAAATCTAGCTCAAGAAGAAGCAAATGGCAGTTTATGGGAGCTAGAGATGCTGGAGCTAAGGAAGAGCTGCGCCAAGTATATGGTGTTTCTGAAAGAACGGAAAGTGACGGAGCTGCAAACCTAATTCAGAAGTTGAGAGCTGTTAATTACGCACTTGGTGAACTGGGACAGTGGTGTGCATATAAGGTTGCACAATCTTTTCTTGCAGCTCTGCAAAATGATGAAAGGGCAAACTATCAACTTGATGTCAAGTTTCAGGAATCCTATCTGAGTAAAGTTGTGTCTCTTTTGAAATGTCAACTGTCAGAGGGTGCCGTTTCCGACAAAAATGATGGAGTAGATGATTCAGAGAATGGTGCAGCTCACAGTGGGTCTGATGAACCCGAAGAGATTGAAGAAGGAGAGCTTCCGGACAGTCACGTTGTCTCTGGTGGGGAGCATGTTGATGTCATAATAGGTGCTGCTGTGGCTGATGGGAAGGTGACCCCCAAGGTGCAGGCTTTAATCAAAATACTCCTCAAGTATCAGAACACAGACGACTTCCGTGCAATCATCTTTGTTGAGCGTGTTGTGTCTGCATTAGTTCTACCCAAGGTTTTTGCGGAGCTTCCATCTCTTAGTTTTGTGAAGTGTGCAAGCTTGATTGGTCACAACAATAGTCAGGAAATGCGGACCCACCAAATGCATGATACAATTGCTAAGTTCCGTGATGGGCGGGTCACATTGTTAGTTGCCACTAGTGTTGCTGAAGAAGGACTTGATATCCGGCAATGTAACGTTGTTATTCGCTTTGATCTTGCGAAGACTGTTCTGGCATACATTCAGTCTAGGGGACGTGCTAGAAAGCCCGGGTCTGATTACATCCTAATGGTTGAGAGGGGAAATTTGTCACATGAAGCATTCCTAAAGAATGCCAGGAACAGTGAGGAAACTTTGCGGAGAGAAGCAATAGAGAGAACAGACCTTAGTCATCTGAAAGATACTTCAAGGTTGATTTCTGTAGATACCCATCCAGAAACAATTTACCAGGTGAAATCTACTGGTGCGGTCGTTAGCTTAAATTCTGCTGTAGGTCTTGTCCACTTCTACTGCTCTCAGCTACCTAGTGACAGATATTCAATTCTTCGACCCGAGTTTATTATGGAGAAGCATGAAAACCCCGGAGGTCCCACTGAGTATTCTTGCAGGCTTCAACTGCCATGCAATGCACCATTTGAAAATCTGGAGGGTCCTATCTGCAGTTCAATCCGCTTGGCACAACAGGCTGTTTGTCTAGCTGCTTGCAAAAAATTGCATGAGATGGGAGCATTCACTGACATGCTATTGCCGGATAAAGGAAGTGGGGGAGAAAAAGAAAAAGCTGAGCAAAATGATGAAGGGGATGCACTTCCAGGGACTGCTAGACACAGGGAGTTCTATCCTGAAGGCGTGGCTGACACACTGAAGGGAGAATGGATCTTATCTGGAAAAGATGCTTGCAACAACTCCAAATTGCTTCATCTTTATATGTATACCATAAAGTGCGAGAATGTAGGCCATTCAAAGGATCCGTTCTTGACTCAGGTTTCAGATTTTGCTGTACTTTTTGGTACTGAACTGGATGCAGAGGTGTTATCGATGTCGATGGATCTATTTATCGCTCGAACCGTGACTACCAAGGCATCTCTTGTCTTTAGAGAGTCAATAGATATCACTGAGAGTCAGTTGGCATCCTTGAAAAGCTTTCATGTAAGATTAATGAGCATTGTCTTGGATGTGGATGTTGAACCATCTACCACTCCTTGGGATCCTGCAAAAGCATATCTGTTTGTCCCAATGGTTGGCGATAAGTCTTTAGATCCTATGAACCAAATTGACTGGCATCTGGTTGAGACAATAATTGGAGCCGATGCATGGAAAAATCCCCTCCAGAAGGCTCGACCAGATGTTTACCTTGGCACTAATGAGAGAACTTTAGGTGGTGATAGAAGGGAATATGGATTTGGGAAATTGCGTCATGGCTTGGCTTTTGGGCAAAAATCACATCCAACCTATGGAATCAGAGGAGCTGTGGCCCAGTTTGATGTGGTGAAAGCTTCAGGATTGGTTCCCAACAGAGATTCCACAGAAACACAAAATAATATCAACATGACTAGCAAAGGAAAATTGATGATGGCAGATACCTGTACCAGTGCAGATGATCTAGTCGGGAGAATTGTAACTGCTGCTCATTCAGGGAAGAGGTTTTATGTTGATTCAATACGCTATGAAATGACAGCAGAGAACTCCTTCCCTAGGAAAGAAGGTTATCTCGGTCCTCTGGAATACAGTTCATATGCTGATTACTACAAGCAAAAATATGGTGTTGATTTGGTTTACAAGCAGCAACCTCTTATAAGAGGGCGTGGTGTGTCATACTGCAAGAACCTTTTGTCCCCTCGATTTGAACACAGTGAAGGACATGAAGATGAAACTGAAGAGACTCATGACAAAACTTACTATGTATTCCTTCCTCCAGAGCTATGCTTAGTCCATCCACTGCCTGGGTCACTCGTTCGTGGTGCTCAGAGGCTGCCTTCAATAATGAGGAGGGTTGAAAGCATGCTGCTTGCAGTTCAGCTTAAGAATATGATAAATTATCCTGTCCCGGCTTTAAAGATCTTGGAGGCCTTGACCGCTGCCTCTTGCCAGGAGACTTTCTGCTATGAAAGGGCAGAGCTTCTAGGAGATGCTTACCTAAAATGGGTTGTTAGTCGTTTTCTTTTCCTAAAACATCCACAGAAACATGAAGGCCAGCTTACTAGGATGAGACAACAAATGGTCAGTAACATGGTATTATATCAGTATGCATTAAGTAAAGGTCTTCAATCATATATCCTAGCAGATCGTTTTGCCCCATCCAGATGGGCAGCTCCTGGGGTTCTGCCTGTCTTTGATGAGGATACGAAGGATGAGGAGTCATCTTTATTTGACCAGGAGCATTCCATTAATAAGACTGAGAGGATGGACAACACTGATGGATTTGAGGATGAAATGGAAGATGGTGAGCTTGAGAGTGATTCAAGTTCTTACCGAGTTCTGTCCAGCAAGACACTTGCAGATGTTGTGGAAGCACTGATTGGGGTATATTATGTCGAAGGTGGTAAGAATGCTGCTAACCACCTTATGAAATGGATTGGGATTCACATAGAGATCGATCCCGATGAGATGGAGTGTATAACAAAGCCATCCAATGTTCCAGACAGCATACTTAGGGGTGTTGATTTTGATGCTTTAGAAGGTGCTCTAAATATTAAGTTTAAAGACAAGGGGCTGCTGATAGAATCCATAACTCATGCCTCCAGACCATCTTCAGGAGTATCCTGTTATCAGCGGTTGGAGTTTGTTGGTGATGCTGTCTTGGACCATCTTATAACCAAGCACTTATTTTTCTCGTACACAGATTTGCCACCAGGACGTCTGACTGACCTTCGAGCTGCTGCTGTAAACAATGAAAATTTTGCACGTGTTGCAGTTAAACACAATCTTCACCTGCATCTGCGACATGGGTCCAGTGCCCTAGAAAAACAGATTAAAGATTTTGTGAAGGAAGTTCAAGATGAATGGTCAAAACCAGGGTTTAACTCTTTTGGTCTTGGAGACTGCAAAGCTCCCAAGGTCCTTGGTGACATCCTTGAATCTATTGCTGGTGCCATTTTTCTTGACAGTGGGAGGAATACCGCCGTTGTTTGGAAGGTTTTTCAGCCTCTTTTGCATCCTATGGTTACACCAGAGACTTTGCCGATGCATCCTGTGCGTGAGCTTCAAGAGCGATGCCAGCAGCATGCTGAAGGCTTGGAGTATAGAGCAAGTCGTGCTGGCAATTTAGCCACTGTTGAAGTATTCATTGATGGGGTACAAGTAGGGGCTGCTCAAAATCCACAGAAAAAAATGGCACAGAAATTAGCTGCCCGAAACGCCCTTGCTGCTTTGAAAGAGAAGGAAGAGAGTAAAATTCAGGAGAAAAATGATGAAAAGGAGACAAAGAATGGGAACCAGACATTTACTAGACAAACATTAAATGATATATGTTTGCGAAGAAACTGGCCAATGCCATTCTACCGGTGTGTGAGTGAGGGTGGTCCTGCACATGCAAAGAGGTTTACATTTGCAGTGCGAGTGAATACAACTGATAAAGGGTGGACGGATGAATGTGTTGGAGAGCCAATGCCAAGCGTCAAGAAGGCCAAAGATTCAGCTGCTGTTCTTCTCTTAGAACTAATAAACAAATTATACTCGTGA 5700 0.4312 MEEEEGANSNNNNNNNNNNRVSSNPSSYWLDACEDISISCDDFIHDFQHHVVDVDVIDDDSQLQQQQQPNDFFGGIDRILDSIKNGAGLPPPPHSEPSPLNVNQQPLLLTHLQPDDDDEEERFNKRARLNDSNNERRINHQSNNNSKDMFERCFNNNNNRKKRPRDNRNNQNFKKRDHSFNRDVKGYWERDKSSPASNELVFRSGTWEPNHIRQDKMPIGETNNNSQEASAKDRVPEEKARQYQLDVLEQAKTRNTIAFLETGAGKTLIAVLLIKSIHQTLHHQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDSRRWQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRNELEKHVPMPSEIVVEYDKAASLCYLHEQIKQMETEVEEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELGQWCAYKVAQSFLAALQNDERANYQLDVKFQESYLSKVVSLLKCQLSEGAVSDKNDGVDDSENGAAHSGSDEPEEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQNTDDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTHQMHDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLKNARNSEETLRREAIERTDLSHLKDTSRLISVDTHPETIYQVKSTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIMEKHENPGGPTEYSCRLQLPCNAPFENLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKAEQNDEGDALPGTARHREFYPEGVADTLKGEWILSGKDACNNSKLLHLYMYTIKCENVGHSKDPFLTQVSDFAVLFGTELDAEVLSMSMDLFIARTVTTKASLVFRESIDITESQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSLDPMNQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDRREYGFGKLRHGLAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDSTETQNNINMTSKGKLMMADTCTSADDLVGRIVTAAHSGKRFYVDSIRYEMTAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLVYKQQPLIRGRGVSYCKNLLSPRFEHSEGHEDETEETHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKNMINYPVPALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYILADRFAPSRWAAPGVLPVFDEDTKDEESSLFDQEHSINKTERMDNTDGFEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEMECITKPSNVPDSILRGVDFDALEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTDLPPGRLTDLRAAAVNNENFARVAVKHNLHLHLRHGSSALEKQIKDFVKEVQDEWSKPGFNSFGLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQHAEGLEYRASRAGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKEESKIQEKNDEKETKNGNQTFTRQTLNDICLRRNWPMPFYRCVSEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELINKLYS* 1900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4095 1899 Pfam PAZ domain 1204 1339 IPR003100 GO:0005515
Mal3g4095 1899 SMART DRBM_3 1822 1895 IPR014720 -
Mal3g4095 1899 SMART DRBM_3 1737 1798 IPR014720 -
Mal3g4095 1899 ProSitePatterns Ribonuclease III family signature. 1597 1605 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 Gene3D - 1827 1896 - -
Mal3g4095 1899 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 836 931 IPR005034 GO:0016891
Mal3g4095 1899 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1736 1799 IPR014720 -
Mal3g4095 1899 Gene3D - 1734 1811 - -
Mal3g4095 1899 SUPERFAMILY PAZ domain 1199 1319 IPR036085 GO:0005515
Mal3g4095 1899 SMART PAZ_2_a_3 1179 1343 IPR003100 GO:0005515
Mal3g4095 1899 ProSiteProfiles Ribonuclease III family domain profile. 1562 1710 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 MobiDBLite consensus disorder prediction 922 946 - -
Mal3g4095 1899 MobiDBLite consensus disorder prediction 1 20 - -
Mal3g4095 1899 Gene3D paz domain 1184 1325 - -
Mal3g4095 1899 ProSiteProfiles PAZ domain profile. 1179 1319 IPR003100 GO:0005515
Mal3g4095 1899 PANTHER ENDORIBONUCLEASE DICER HOMOLOG 1 206 1897 - -
Mal3g4095 1899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 374 IPR027417 -
Mal3g4095 1899 Pfam double strand RNA binding domain from DEAD END PROTEIN 1 1821 1892 - -
Mal3g4095 1899 CDD RIBOc 1578 1733 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 PANTHER DICER-RELATED 206 1897 - -
Mal3g4095 1899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 287 774 IPR027417 -
Mal3g4095 1899 Pfam Type III restriction enzyme, res subunit 248 406 IPR006935 GO:0003677|GO:0005524|GO:0016787
Mal3g4095 1899 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1821 1896 IPR014720 -
Mal3g4095 1899 ProSiteProfiles Ribonuclease III family domain profile. 1362 1521 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 Coils Coil 1791 1818 - -
Mal3g4095 1899 MobiDBLite consensus disorder prediction 209 238 - -
Mal3g4095 1899 Pfam Dicer dimerisation domain 836 924 - -
Mal3g4095 1899 Gene3D Ribonuclease III domain 1558 1731 IPR036389 GO:0004525|GO:0006396
Mal3g4095 1899 CDD DEXHc_dicer 239 438 - -
Mal3g4095 1899 MobiDBLite consensus disorder prediction 925 946 - -
Mal3g4095 1899 Gene3D Dicer dimerisation domain 831 933 IPR038248 -
Mal3g4095 1899 SMART ultradead3 236 439 IPR014001 -
Mal3g4095 1899 MobiDBLite consensus disorder prediction 588 607 - -
Mal3g4095 1899 CDD DSRM_DCL_plant 1827 1896 - -
Mal3g4095 1899 Pfam Ribonuclease III domain 1376 1521 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 Pfam Ribonuclease III domain 1597 1710 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 Gene3D - 634 800 IPR027417 -
Mal3g4095 1899 MobiDBLite consensus disorder prediction 136 153 - -
Mal3g4095 1899 SMART helicmild6 677 763 IPR001650 -
Mal3g4095 1899 MobiDBLite consensus disorder prediction 112 193 - -
Mal3g4095 1899 MobiDBLite consensus disorder prediction 154 192 - -
Mal3g4095 1899 Pfam Helicase conserved C-terminal domain 644 761 IPR001650 -
Mal3g4095 1899 SUPERFAMILY dsRNA-binding domain-like 1692 1816 - -
Mal3g4095 1899 CDD RIBOc 1360 1537 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 MobiDBLite consensus disorder prediction 112 135 - -
Mal3g4095 1899 Gene3D - 234 479 IPR027417 -
Mal3g4095 1899 CDD SF2_C_dicer 641 771 - -
Mal3g4095 1899 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 247 424 IPR014001 -
Mal3g4095 1899 MobiDBLite consensus disorder prediction 586 616 - -
Mal3g4095 1899 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 647 808 IPR001650 -
Mal3g4095 1899 Gene3D Ribonuclease III domain 1344 1538 IPR036389 GO:0004525|GO:0006396
Mal3g4095 1899 SMART riboneu5 1358 1540 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 SMART riboneu5 1577 1733 IPR000999 GO:0004525|GO:0006396
Mal3g4095 1899 MobiDBLite consensus disorder prediction 83 102 - -
Mal3g4095 1899 SUPERFAMILY RNase III domain-like 1335 1539 IPR036389 GO:0004525|GO:0006396
Mal3g4095 1899 SUPERFAMILY RNase III domain-like 1561 1731 IPR036389 GO:0004525|GO:0006396
Mal3g4095 1899 SUPERFAMILY dsRNA-binding domain-like 1825 1894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4095 Mal-Chr3 119568173 119578271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4095 660 803 Eukaryotic Initiation Factors Gene Family AT5G11200 28.571 5.99e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4095 K11592 - gmx:100811631 3178.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4095 3 119568173 119578271 Mal3g4095 3 119568173 119578271 ECH