Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4093 ATGGATGCATACTCCTCTGGAGAAGAAGTGGTTCTCAAGACTAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAAGACGAACATAATCGATTTCTAGAAGCCCTCAAGCTATATGGCCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAAACTGCTGTGCAAATCAGGAGCCATGCGCAAAAATTCTTTTCAAAGTTGGAGAAGGAAGCACTTGTAAAAGGTGCTGCATTAGGACAAGCTCTTGACATAGACATCCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGCAAGACCAATTTTGGTACCCCAACATTACATAGTGGAGCAAAGTATGGAAAGTCACTTATTGCAACTGCATCTTCACATGGTAAACAAGCAATGGATTTTGAGAAAGAATCACTTCTAGAGAACCATAAAGATGAGGAAAGGCCAACAACTGTAAAAGAAAATAACAATGAAAATTGCCCAAAAGTATTAACAATCCTCAAGGAGGCATCCTGTTCATCTGTATCTTCAGCAATCAAGAGTTCAAACTCAATGTCAGTGCCACAGACATTTTCCTGCACCGTAAGAGAATTTACACCTTCAGTGAAAGACGTAATAACTCGAGATGAAACGAATGAATCTTTTCCTACTACTGAGATTGAAAATCAGATGTTGGACATAGATCATGGCAAACACACACAAAAGACTGATGGCATTTGTAAAACCTCTAAGTTGGAGAATTCTTATTCTCCTAAATCGGTTCAATCCGGGAAAACAGATGGTCTTACTTCTGCATTAACAACAGATGAGATGCAAAGTAATCAGAATTACCCAAGACATATCACTGTGCACGTTGTTGATGGGAACCTTGGAACTAGTACTCAAACTCCATCACAAAATATGCTGATTCAGGACTCCACATTTCAGCCAATTGGAGGGATTAATGGGCAGCCTAATTTTTTCACAAATCCAGCTGCTTCAAACACAAGTGAAAGTCAAAATAACATGGCACGGTCCTCTATTCATCAACCATTTCCTCCTTGTCCTCCATTCGCACAGCATAATCATGATGATTACCAATCCTTTCTCAACATGTCTTCTACATTTTCAAGTGTTATTGTCTCTACCTTGCTGCAACACCCTGCAGCCCATGCTGCAGCAAGTTTTGCGGCTACATTTTGGCCCTATGCAAATGTAGAATCTTCAGCTGATTCTCCTGCTTGCTCTCAAGGAGGTTTCCCATCTAGACAAATTAGTTCACCTCCTAGTGTAGCAGCTATTGCAGCTGCGACAGTAGCTGCTGCGACTGCATGGTGGGCAGCTCATGGACTGCTTCCTCTGTGCGCTCCACTCCATACAGCTTTTGCCTGTCCTCCTGCATCAACAACTGTAGTTCCATCAACAAATATTTGCAAAGAACCACCAAAGACAGAACAAGGAGATATTACACGACAAAATCCTCCTCTGCAAGATCAGTTACTAGATCCAGAAGACTCGGAAGCATTGCAAGCTCAACATTCAGCTTCCAAGTCACCAGCTGTTTCTTCATCTGAATCAGAGGAGAGTGGAGATACTAAGTTAAATACTTCATCAAAGGCCACTATTAATCTTGATATAAACCAACCAATTTCTGAGAACCCTGATTCCAACAAAATGGAGGGCAGAAAACTAATAGACCGGTCTTCTTGTGGTTCCAACACAACCTCTAGCTGTGAAGAGACTGATGCGCTAGAGAAGGATGAGAAAGAAAAGGAAGATTCCAAAACACCTGATGCGGACCATTTAGCTACTGATCCTAGCAGTCGTCGATATAGAAGCATTAGCAACCTTCTGGATTCTTGGAAGGAGGTGTCTGAAGAGGGACGACTTGCCTTTCGGGCTCTATTCTCCAGAGAGGTGTTGCCCCAAAGCTTTTCACCTCCTCATGATTTGATAAATAAGAATAATCAGATGGACAATATGAAGGATAACGAGCAAAAAACAGACCACAAAGATCACCTTGACAGCAAGAAATGCATTTGTAATTGTGACGGGGCACAGCAAAACCTACCATTTGTACAAAATAACAATGAGGAGGGACTGCTAACCATAGGTCTTGGACAAGGCAAGCTTAAGACTCGTCGAACAGGATTTAAACCTTACAAAAGATGTTTAGTAGAGGCCAAGGAAAACAGGGGTGGAACAGCCTGCAACCAAGTTGAAGAGACGGGTCCCAAGAGGATACGCCTGGAAGGGGGGACTTCTATTTGA 2265 0.4247 MDAYSSGEEVVLKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGAALGQALDIDIPPPRPKRKPSNPYPRKTNFGTPTLHSGAKYGKSLIATASSHGKQAMDFEKESLLENHKDEERPTTVKENNNENCPKVLTILKEASCSSVSSAIKSSNSMSVPQTFSCTVREFTPSVKDVITRDETNESFPTTEIENQMLDIDHGKHTQKTDGICKTSKLENSYSPKSVQSGKTDGLTSALTTDEMQSNQNYPRHITVHVVDGNLGTSTQTPSQNMLIQDSTFQPIGGINGQPNFFTNPAASNTSESQNNMARSSIHQPFPPCPPFAQHNHDDYQSFLNMSSTFSSVIVSTLLQHPAAHAAASFAATFWPYANVESSADSPACSQGGFPSRQISSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPASTTVVPSTNICKEPPKTEQGDITRQNPPLQDQLLDPEDSEALQAQHSASKSPAVSSSESEESGDTKLNTSSKATINLDINQPISENPDSNKMEGRKLIDRSSCGSNTTSSCEETDALEKDEKEKEDSKTPDADHLATDPSSRRYRSISNLLDSWKEVSEEGRLAFRALFSREVLPQSFSPPHDLINKNNQMDNMKDNEQKTDHKDHLDSKKCICNCDGAQQNLPFVQNNNEEGLLTIGLGQGKLKTRRTGFKPYKRCLVEAKENRGGTACNQVEETGPKRIRLEGGTSI* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4093 754 MobiDBLite consensus disorder prediction 507 553 - -
Mal3g4093 754 MobiDBLite consensus disorder prediction 88 116 - -
Mal3g4093 754 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Mal3g4093 754 Gene3D - 26 73 - -
Mal3g4093 754 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Mal3g4093 754 PANTHER PROTEIN LHY 2 736 - -
Mal3g4093 754 MobiDBLite consensus disorder prediction 469 605 - -
Mal3g4093 754 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Mal3g4093 754 MobiDBLite consensus disorder prediction 469 497 - -
Mal3g4093 754 PANTHER SWI/SNF COMPLEX-RELATED 2 736 - -
Mal3g4093 754 MobiDBLite consensus disorder prediction 578 605 - -
Mal3g4093 754 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Mal3g4093 754 SMART sant 23 71 IPR001005 -
Mal3g4093 754 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Mal3g4093 754 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Mal3g4093 754 CDD SANT 26 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4093 Mal-Chr3 119553687 119561554 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g4093 Myb_DNA-binding 7.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4093 K12133 - gmx:778086 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4093 3 119553687 119561554 Mal3g4093 3 119553687 119561554 ECH