Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4092 ATGGCGAGTCGTCTACCTGAAGAGCAGCAACAGCAACAGCAACAGGAAGAATTAGAAGATGAAGAAAGCTTTTCATACGCCGTTCAGCTCACAAACTCAATAGTGCTTTCCATGGCACTTCAATCCGCTACTGAACTCGGTGTATTTGAAGTCTTGCAGAAAGATTCTCCACTCTCTGCCGACGACATCGCTTCCCGTCTCTCCTGCACCAATCCAGATGCCCCCAAAATGTTAGATCGTATTCTCGCTCTTCTTGCCTCTCACTCTGTACTCCACTGTTCTGTACTTCCCGATCAACAAAACCTTGGATCCTTTCACAGACTCTACACTATGGCTCCTGTTGCCAAATTCTTTGCTCCTAATTCCGATGGCGTTTCCTTAGGTCCCTTGATGGCATTGCATACCGATAAGATCTTCTTACAAAGCTGGTCCCAGCTTAAAGATGCAATTCGGGAAGGGGGTATTCCATTCAACAGGGTTCACGGCACCCATGCCTTTGAGTATCCCAGCATAGACTCCAGGTTCAATCAAGTTTTCAATACAGCCATGATCAATCACACCACTATAGTTATGAACAAGGTTCTTCAATGCTACAGAGGTTTTGACGAGGTCAAAACCCTTGTCGATGTTGGTGGTGGTCTTGGGGTCAACATTAACTTGATCACTTCTAAATACCCTCATATACAGGGTATCAATTTCGACTTGCCTCATGTCATACAACATGCCCCTTCCTATCCTGGAGTGGAACACGTTGGCGGGGATATGTTTGAAAGTGTGCCTAAAGCAGATGCCATCTTTATGAAGTGGATACTTCATGATTGGAGTGATGAGCAGTGCTTGAAGCTTTTGAAGAATTGCTATGATGCTATTCCTGATGATGGAAAGGTGATTGTTTTGGAGGCAGTTCTTTCTATTATACCAGAGAATAATGCTGCTTGGAAGTTTGCCGCCCAATCGGATGTTCTGATGATGACTCAAAATCCAGGAGGAAAAGAAAGAACTGAGCAAGAATTCATGGATTTAGCAAATGGAGCTGGATTTAGTGGCATTAGATATGAATGTTATGTCCATACTTTTTGGGTTATGGAGTTCTTCAAGTAG 1101 0.4387 MASRLPEEQQQQQQQEELEDEESFSYAVQLTNSIVLSMALQSATELGVFEVLQKDSPLSADDIASRLSCTNPDAPKMLDRILALLASHSVLHCSVLPDQQNLGSFHRLYTMAPVAKFFAPNSDGVSLGPLMALHTDKIFLQSWSQLKDAIREGGIPFNRVHGTHAFEYPSIDSRFNQVFNTAMINHTTIVMNKVLQCYRGFDEVKTLVDVGGGLGVNINLITSKYPHIQGINFDLPHVIQHAPSYPGVEHVGGDMFESVPKADAIFMKWILHDWSDEQCLKLLKNCYDAIPDDGKVIVLEAVLSIIPENNAAWKFAAQSDVLMMTQNPGGKERTEQEFMDLANGAGFSGIRYECYVHTFWVMEFFK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4092 366 PANTHER O-METHYLTRANSFERASE 12 366 IPR016461 GO:0008168
Mal3g4092 366 MobiDBLite consensus disorder prediction 1 20 - -
Mal3g4092 366 Pfam Dimerisation domain 38 86 IPR012967 GO:0046983
Mal3g4092 366 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 12 366 - -
Mal3g4092 366 PIRSF O-mtase 4 366 IPR016461 GO:0008168
Mal3g4092 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 364 IPR029063 -
Mal3g4092 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 366 IPR016461 GO:0008168
Mal3g4092 366 Gene3D - 4 118 IPR036388 -
Mal3g4092 366 Pfam O-methyltransferase domain 143 348 IPR001077 GO:0008171
Mal3g4092 366 SUPERFAMILY "Winged helix" DNA-binding domain 19 121 IPR036390 -
Mal3g4092 366 Gene3D Vaccinia Virus protein VP39 120 366 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4092 Mal-Chr3 119543241 119547421 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4092 10 366 Monolignol Biosynthesis Gene Families AT5G54160 51.532 4.01e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4092 K13066 - gmx:100803633 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4092 3 119543241 119547421 Mal3g4092 3 119543241 119547421 ECH