Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4090 ATGGCTCCTCCTTCAACAGAATCTAATCAACCACTTGCCAATGGAAAAGAAAAACATCTTAAACCAGAAGAAGAAGAAGAAGAAGAAGATGAAGCCCTGGAATTTTGCACACAAATAACAGGTTCAATTGTGGTTCCATTGGCTTTGCGGTCAGCCATTGATCTTGGCATCTTTGACATACTAGCCAAAGCAGGTGAAGGTGCACAACTCTCTGCAGATGACATTGCTGTTAAGATTGGAACCAACAACCCTAAAGCACCAACAATGTTGGATCGTCTTCTTAGGTTGTTGGCAAGTCACTCAATTCTAAACTCCTCTGTTCCTCAAAACCTTCAGAGATTCTACAGCCTCTCCAATCGCTCCAAATTTTTTGTCACCGATGCTGATGGTGTCTCATTGGGACCCACATTGGCATTACTCCTCGACAACGTCTTCTACCAAAGCTGGTCTGAACTGAAAGGAGCGATCGTTGAAGGAGGCATACCGTTCAATAGGGTTTATGGAATGCATGCGTTTGAGTATCCACGTGTGGATCAAAGGTTCAATGATGTTTTCAACAAAGCTATGGTTAATTCAACCACTATAAATATGAAAAGGATTCTTGAATGTTATCAAGGTTTTGAGCACGTGACTAAGCTGGTTGATGTTGGTGGTGGTCTTGGAATTAACCTCAAATTAATCACATCAAAATATTCTCATATTCAGGGAATTAATTTTGACTTGCCTCATGTAGTACAACATGCCCCTGTTTACCCAGGAGTGGAACATGTGGGAGGAGATATGTTTGAGAGCGTTCCTGCAGGGGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACAGTGCTTGAAGGTGTTGAAAAATTGTTACAAAGGTATTCCTGAGGATGGAAAGGTGATTGTGGTGGACACAATCCTTCCAGTTATGGCAGAGACAACAGCTAGCACAAAGTATGCATGCATGTCTGATGTTTTAATGATGACTCAAAATCCAGGAGGAAAAGAGCGAACTGAGCAGGAATTCAAGGATTTGGCAAAAGAATCTGGATTTAGTGGCATCAAACTTATATGCTGTGTATCTGGACTATGGATTATGGAGTTTTTTAAATAG 1119 0.4111 MAPPSTESNQPLANGKEKHLKPEEEEEEEDEALEFCTQITGSIVVPLALRSAIDLGIFDILAKAGEGAQLSADDIAVKIGTNNPKAPTMLDRLLRLLASHSILNSSVPQNLQRFYSLSNRSKFFVTDADGVSLGPTLALLLDNVFYQSWSELKGAIVEGGIPFNRVYGMHAFEYPRVDQRFNDVFNKAMVNSTTINMKRILECYQGFEHVTKLVDVGGGLGINLKLITSKYSHIQGINFDLPHVVQHAPVYPGVEHVGGDMFESVPAGDAIFMKWILHDWSDEQCLKVLKNCYKGIPEDGKVIVVDTILPVMAETTASTKYACMSDVLMMTQNPGGKERTEQEFKDLAKESGFSGIKLICCVSGLWIMEFFK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4090 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 372 - -
Mal3g4090 372 Gene3D - 13 124 IPR036388 -
Mal3g4090 372 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Mal3g4090 372 PIRSF O-mtase 14 372 IPR016461 GO:0008168
Mal3g4090 372 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
Mal3g4090 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 370 IPR029063 -
Mal3g4090 372 PANTHER O-METHYLTRANSFERASE 1 372 IPR016461 GO:0008168
Mal3g4090 372 Pfam Dimerisation domain 48 98 IPR012967 GO:0046983
Mal3g4090 372 SUPERFAMILY "Winged helix" DNA-binding domain 27 127 IPR036390 -
Mal3g4090 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 372 IPR016461 GO:0008168
Mal3g4090 372 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4090 Mal-Chr3 119530447 119531904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4090 29 372 Monolignol Biosynthesis Gene Families AT5G54160 53.448 6.36e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4090 K13066 - gmx:100789402 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4090 3 119530447 119531904 Mal3g4090 3 119530447 119531904 ECH