Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4087 ATGTGTGTGTATGAGTTTAGGATAGGAGGAAGCAAGAGAGGCACGTGTGAAACAGGTTGGCCCCACAAAGTGAAATGGATGGTGGAAAAGAAGGCACGTGAGGATGGTAAAGGAGAAGAGGAGAGAAGAGAAATAGATCTCAATGAATCTGAGACCACAAAGAAAGCAAAGATATTTTTTTGTATCATTTTCGTGGCTATGCAGAGCAACAACAAGTTTCTTCCTCCCACGATGCTTAAGGTCTTACTCGTCGAACCTGATGATTCTACTCGCCACATTATTTCTGCACTTCTCCGCAAATGCGGCTACAAAGTTGTTGCAGTTCGTGATGGGTTAAAGGCATGGGAAACATTGAAGAACAAATCACTTGACATAGATCTCGTATTAACAGAAGTAGATCTCCCATCAATATCCGGTTTTTCACTACTTACCTCAATCATGGACCATCACTATTGCAAAAACATTCCTGTCATAATGATGTCTTCTCAAGATTCAGTCAGCACCGTGTTCAAATGCATGCTAAACGGGGCCGTCGATTTTCTTATTAAACCTGTTCGGCAGAATGAACTTAGGAACTTGTGGCAGCATGTGTGGAGAAGAAATACTAATAAACTTGATGTTGCTGCAGAAAACAATGCTGCAAGCAATAATTCTAGTGGTTCTGTGGCTTCCATGCAGAAAAATATCGAACGCAGTGAAAAAACTAGTGAGGCTCATGATATGTCCCAGCTGAAGAGTTCTTCGAGTTTGAGCAATACCAACCAGGTGAAGCAAGAAAATTCTATCATATATGAAAGGGAGTTGGCTGAGTGTAACGATGAAACTGGAGAAAAATCAACTATAATAGCATCTAAATATGAAAGGGAGTTGGCTGAGTGTAACGACGAAACTGGAGAAAAATCAACTATAATAGCATCTAAAGCTGCGGGGTGTGACAAAATTTCAACAGGTTTAAGGCTTGGTCAAAGCTATGATTATAGTGAAACAGAAAACCAAGATGAAGTATTAAGAACAAGGTTAAGCAAAGTCAATCCTCATATTAATACAAAGATTCATCAATGCAATGATGAACTAGAAGACCATCCTGCTGGAGCTATTGACTTAATGGCTAGTTTTGAGAATCTTCCAAAGAACAGTTATGCAAATTGTAGTTTCAGTTGTGCACAATTGGAACTTTCTTTACAAAGAGATTCTCCTGGCAGCTCACCTAAACCTACCACTGAAGAAAGGCAAATATTGAATCATTCAAATGCTTCTGCGTTTTCTAGGTATGGTAGCAGTACGGTGTTGCAGCCTTTATTTCCAACAAAGAATTCTCATGAATCAAAACAATTATCGGAAAATATAAATTTTTCTCATCAGTATGATGGAAAAAAACAAAAGCAAGAAAATATCACATATCTGGTGATTGGTCAGTCTGGACAAGTTGATACAAAATTTCTGAACGGTCAACTTGAATTCTTTCCAGCCACCGGAGCCACTACGGATAATAAGTCCATGGAACATGATAATGTTTTACATTCTATGTTCAAAGCACAATCAGGCATTCAGCCCACATGGACACCAAAATCAGTGTTCCAAAAAGAGAGTTCTCCATTTCCCACAAGTATTTCCTCCCATTCCAATCCTAAAAGTCAGAACTCAGAACCTCATCGCTGGTCGGATGATGCCACCTATACTTGTACTATGCATGACTCTCCATCTAATGGTCAAAGTTGTACTAGTTTTTACCATGATGCAGAAAGTCATAAAGCCCGTAGTGTATGTGAAGGCCCAGGCATCGGAAGTGATGGAAATGCCCCTTCAGTTGTTGCAGGCAAGAACAACCTTGAAAGTTGTATGAATAATGATCACCATGACGGGCTTAGAGATACAAGTTCTCATCGCACCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGACTGAAGCGAAAAGACAGATGCTATGACAAAAAGGTTCGATATGAAAGCCGGAAAAGACAGGCAGAGAACCGCCCGCGGGTGAAAGGGCAGTTTGTTCGCCAAGTACATGGTGAACTTCTGGTAGCTGAAACCAGAGGCTACTGA 2067 0.4045 MCVYEFRIGGSKRGTCETGWPHKVKWMVEKKAREDGKGEEERREIDLNESETTKKAKIFFCIIFVAMQSNNKFLPPTMLKVLLVEPDDSTRHIISALLRKCGYKVVAVRDGLKAWETLKNKSLDIDLVLTEVDLPSISGFSLLTSIMDHHYCKNIPVIMMSSQDSVSTVFKCMLNGAVDFLIKPVRQNELRNLWQHVWRRNTNKLDVAAENNAASNNSSGSVASMQKNIERSEKTSEAHDMSQLKSSSSLSNTNQVKQENSIIYERELAECNDETGEKSTIIASKYERELAECNDETGEKSTIIASKAAGCDKISTGLRLGQSYDYSETENQDEVLRTRLSKVNPHINTKIHQCNDELEDHPAGAIDLMASFENLPKNSYANCSFSCAQLELSLQRDSPGSSPKPTTEERQILNHSNASAFSRYGSSTVLQPLFPTKNSHESKQLSENINFSHQYDGKKQKQENITYLVIGQSGQVDTKFLNGQLEFFPATGATTDNKSMEHDNVLHSMFKAQSGIQPTWTPKSVFQKESSPFPTSISSHSNPKSQNSEPHRWSDDATYTCTMHDSPSNGQSCTSFYHDAESHKARSVCEGPGIGSDGNAPSVVAGKNNLESCMNNDHHDGLRDTSSHRTSQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQVHGELLVAETRGY* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4087 688 MobiDBLite consensus disorder prediction 593 635 - -
Mal3g4087 688 MobiDBLite consensus disorder prediction 241 257 - -
Mal3g4087 688 SMART REC_2 79 194 IPR001789 GO:0000160
Mal3g4087 688 SUPERFAMILY CheY-like 77 207 IPR011006 -
Mal3g4087 688 MobiDBLite consensus disorder prediction 210 229 - -
Mal3g4087 688 Pfam Response regulator receiver domain 81 192 IPR001789 GO:0000160
Mal3g4087 688 MobiDBLite consensus disorder prediction 613 635 - -
Mal3g4087 688 Coils Coil 645 665 - -
Mal3g4087 688 MobiDBLite consensus disorder prediction 524 559 - -
Mal3g4087 688 CDD psREC_PRR 81 184 - -
Mal3g4087 688 ProSiteProfiles CCT domain profile. 633 675 IPR010402 GO:0005515
Mal3g4087 688 Pfam CCT motif 633 675 IPR010402 GO:0005515
Mal3g4087 688 ProSiteProfiles Response regulatory domain profile. 80 198 IPR001789 GO:0000160
Mal3g4087 688 PANTHER TWO-COMPONENT RESPONSE REGULATOR 68 666 IPR045279 GO:0009736
Mal3g4087 688 MobiDBLite consensus disorder prediction 210 257 - -
Mal3g4087 688 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 ISOFORM X1 68 666 - -
Mal3g4087 688 Gene3D - 79 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4087 Mal-Chr3 119511481 119516076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4087 356 677 Response Regulator Gene Family AT5G24470 30.973 1.78e-20 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mal3g4087 Response_reg 6.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4087 K12130 - gmx:100779346 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4087 3 119511481 119516076 Mal3g4087 3 119511481 119516076 ECH