Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4080 ATGTCGCTCGGAGAGACTGCTTGCTCATACGCCCTTCTCATCCTTGAGGATGACAACATTCCAGCCACCGCTGACAATATCACCACTCTGTTGAAAACTGCAAAGGTTGATGTTGAATCCTTTTGGCCCGCCTTATTCGCTAAACTTGCTGAGAAGAAAAATATTAGGGATTTGATTTCCAGTGCTGCTGGCGGTGGTGCTCCCACAGCTGTGGCCGCTGCTCCAGTTGCTGCTGCAGGTGGTGGTGCCGCCGCTGCTGCTCCAGCAGCCGCCGAGAAGAAGCCAGAGCCAGAAGAAGAAGAGAGTGACGAGGAAATGGGATTTGGCTTGTTTGATGAATAG 342 0.5205 MSLGETACSYALLILEDDNIPATADNITTLLKTAKVDVESFWPALFAKLAEKKNIRDLISSAAGGGAPTAVAAAPVAAAGGGAAAAAPAAAEKKPEPEEEESDEEMGFGLFDE* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4080 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN 1 105 - -
Mal3g4080 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 105 - -
Mal3g4080 113 CDD Ribosomal_P1 5 60 - -
Mal3g4080 113 MobiDBLite consensus disorder prediction 85 113 - -
Mal3g4080 113 Pfam 60s Acidic ribosomal protein 23 111 - -
Mal3g4080 113 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mal3g4080 113 MobiDBLite consensus disorder prediction 97 113 - -
Mal3g4080 113 Gene3D - 1 62 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4080 Mal-Chr3 119436126 119436560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4080 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 52.632 1.03e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4080 K02942 - gmx:100791962 107.842