Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4071 ATGGGTCAGTGTTACGGGAAGACTATTCCCGGCGCCGGGAGCCACCGTGACCAAAACACAACCACCATAATTGACTCCTCCGGTGGCGGTGACGGAAGTCGCACTCCGTTACCATCCTTTGCCAACGGAATTCCATCGGTGAAGAATACTCCAGCTCGGTCTTCTTCACACGCCAGTCCATGGCCTAGTCCTTACCCTCACGGCGTCAACCCGAGTCCATCGCCAGCTAGGGCGTCCACGCCGAGAAGATTTTTCCGGCGGCCGTTTCCCCCGCCTTCTCCGGCGAAGCATATTAGGGAGTCTCTAGCGAAGAGGTTGGGGAAGCCGAAGCCGAAAGAGGGACCTATACCGGAGGAGCATGGTGTGGAAACGGATTCACAGTCGCTGGATAAGAGCTTTGGGTATAGCAAGAATTTTGGAGCTAAGTATGAGTTAGGGAAAGAAGTGGGACGAGGGCATTTTGGTCATACTTGTTCTGCTAGGGCCAAGAAGGGTGACCTCAAAGATCAACCTGTTGCTGTTAAGATCATTTCTAAGTCCAAGATGACCTCGGCAATAGCAATTGAAGATGTTCGTAGGGAGGTGAAGCTATTGAAAGCTCTGTCGGGCCATAAGCATCTTATCAAATTTCACGATGCTTGTGAGGATGCCAATAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACCGAATTTTGTCAAGGGGAGGAAGGTATACCGAGGAGGATGCAAAAGCTATTGTTTTGCAGATTCTAAGTGTAGCTGCCTTTTGTCACCTTCAAGGTGTTGTGCATCGTGACTTGAAACCTGAGAATTTCCTCTTCACTTCAAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTGTCTGACTTCATCAGGCCAGAAGAACGGTTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCTTATAGTGTGGAAGCGGATATATGGAGTATTGGTGTTATCACCTACATCTTATTATGTGGAAGTCGACCATTCTGGGCACGAACGGAATCTGGAATCTTTCGTACAGTTCTCAGAGCTGATCCTAACTTCGATGATTTACCTTGGCCATCTGTGTCTCCAGAGGGCAAGGACTTTGTTAAAAGGCTCCTAAATAAGGACTACAGGAAAAGAATGACCGCTGCTCAAGCTCTAACTCACCCTTGGTTAAGGGATGAAAGCCGTCCGATCCCTTTAGATATATTAATTTATAAGTTGGTGAAGTCTTATCTTCACGCAACACCATTCAAACGTGCAGCAGTGAAGGCCCTTTCAAAAGCATTGACAGAGGATCAGTTGGTGTATCTTAGAGCTCAATTCAGATTGTTGGAACCAAATAGAGACGGGCACGTCTCCCTCGACAACTTCAAAATGGCTCTTGCACGTCATGCAACTGATGCCATGAGGGAATCAAGGGTTCTCGACATCATACACACGATGGAACCGCTTGCGTATAGAAAGATGGATTTTGAAGAATTTTGTGCAGCTGCCACTAGCACATATCAATTGGAGGCACTTGATGGGTGGGAAGATATTGCCTGCGCTGCATTCGAGCATTTTGAGAGTGAGGGTAACCGTGTGATATCGATCGAAGAATTAGCAAGAGAGCTAAATCTTGGTCCTTCGGCGTATTCAGTTCTCAGAGATTGGATTCGTAATACTGACGGAAAACTTAGTTTACTTGGATATACAAAATTTTTGCATGGCGTGACTCTGCGGAGTTCACTTCCAAGACCTCGTTAG 1788 0.467 MGQCYGKTIPGAGSHRDQNTTTIIDSSGGGDGSRTPLPSFANGIPSVKNTPARSSSHASPWPSPYPHGVNPSPSPARASTPRRFFRRPFPPPSPAKHIRESLAKRLGKPKPKEGPIPEEHGVETDSQSLDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARAKKGDLKDQPVAVKIISKSKMTSAIAIEDVRREVKLLKALSGHKHLIKFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKAIVLQILSVAAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPEERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITYILLCGSRPFWARTESGIFRTVLRADPNFDDLPWPSVSPEGKDFVKRLLNKDYRKRMTAAQALTHPWLRDESRPIPLDILIYKLVKSYLHATPFKRAAVKALSKALTEDQLVYLRAQFRLLEPNRDGHVSLDNFKMALARHATDAMRESRVLDIIHTMEPLAYRKMDFEEFCAAATSTYQLEALDGWEDIACAAFEHFESEGNRVISIEELARELNLGPSAYSVLRDWIRNTDGKLSLLGYTKFLHGVTLRSSLPRPR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4071 595 PANTHER CDPK-RELATED KINASE 3 48 588 - -
Mal3g4071 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Mal3g4071 595 Gene3D Transferase(Phosphotransferase) domain 1 232 413 - -
Mal3g4071 595 MobiDBLite consensus disorder prediction 98 126 - -
Mal3g4071 595 ProSiteProfiles EF-hand calcium-binding domain profile. 446 481 IPR002048 GO:0005509
Mal3g4071 595 CDD STKc_CAMK 142 404 - -
Mal3g4071 595 SUPERFAMILY EF-hand 431 584 IPR011992 -
Mal3g4071 595 SUPERFAMILY Protein kinase-like (PK-like) 142 428 IPR011009 -
Mal3g4071 595 Gene3D - 414 585 - -
Mal3g4071 595 Pfam Protein kinase domain 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4071 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 588 - -
Mal3g4071 595 SMART serkin_6 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4071 595 ProSiteProfiles Protein kinase domain profile. 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4071 595 MobiDBLite consensus disorder prediction 13 61 - -
Mal3g4071 595 Gene3D Phosphorylase Kinase; domain 1 136 231 - -
Mal3g4071 595 MobiDBLite consensus disorder prediction 1 129 - -
Mal3g4071 595 ProSitePatterns Protein kinases ATP-binding region signature. 149 175 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4071 Mal-Chr3 119323284 119329462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4071 17 589 EF-hand Containing Proteins AT3G50530 59.738 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal3g4071 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4071 - - rcu:8266291 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4071 3 119323284 119329462 Mal3g4071 3 119323284 119329462 ECH