Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4070 ATGGGAAGTGGTGAGAAAAGTTTGAAAGGGTTTCTTCTGCATGGGAAGAAGCAAGAGTTCAGAGGTGTACCAAAAGGGTGTCTTGCAGTCAAAGTTGGTCAAGGAGAAGATCAACAAAGGTTCGTGGTGCCAGTGATATACTTCAATCACCCACTCTTCATGCAGCTTCTCAAAGAAGCAGAGGAAGAATATGGTTTTGATCATAAAGGAACAATAACCATCCCTTGTCGTGTTGAGGAGTTCAGAAATATTAGAGGTTTAATTGATAGGGAAAAGTCTCTTCATCACAATCATCATATTGGATGCTTTGGTTTCTGA 318 0.4057 MGSGEKSLKGFLLHGKKQEFRGVPKGCLAVKVGQGEDQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDHKGTITIPCRVEEFRNIRGLIDREKSLHHNHHIGCFGF* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4070 105 Pfam Auxin responsive protein 21 84 IPR003676 GO:0009733
Mal3g4070 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 99 IPR003676 GO:0009733
Mal3g4070 105 PANTHER SMALL AUXIN-UP RNA-RELATED 15 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4070 Mal-Chr3 119321510 119321827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4070 23 89 Calmodulin-binding Proteins AT3G43120 52.239 1.40e-17 71.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4070 3 119321510 119321827 Mal3g4070 3 119321510 119321827 ECH
Mal3g4070 3 119321510 119321827 Mal2g1729 2 20720111 20720452 PCT