Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4065 ATGGTGATCTTCATATGCAGCCCTATATTCTTCAAAATCGCGATCCTCTTATTCTCAATTTATGCAATACACATGATATTCGAAACAGGTCTAATACACGAGACAAAGAAACTATGGAGAACCATCGAAGATTGGTTCCACGTGTACCAAGTATTTTATGTCCCAGAACTGAACGACAACATGCAACACAACAACCTCTACAGAAAACTCTCTCTCTACCTTCATTCCCTGCCTTCCCTCCAAGACTCACACTTAAACAATCTCGTCACATCCAATACTAACCAAAACGACGTCGTTCTCTCCCTCGCCCCCAACCAAACCATCCACGATCATTTTCTCGGTGCCACCGTCTTCTGGTTCAACCAAACCCAACCTAACAAAACCTTCACTCTCAAGATCAGAAAACTCGATAAGCGAAGAATCCTTCGTCCTTATCTTCAACACATTCACGCCGTCGTTGACGAAATTGAAAATCAAGGGAATCGCGATTTGCGTCTCTACATGAACGCCGCTGATTTCGGACGCTGGAGATTCGTTCCGTTTACTCATCCTTCCACTTTCGAAACAATCGCAATGGAATTAGATCTCAAAAACAGAGTCAAATCCGATCTAGAATCATTTCTCAAAGGGAAACAATACTACCACCGCCTTGGCCGTCTCTGGAAACGGAGCTTCCTCTTGTACGGTCCTTCCGGCACCGGAAAAACAAGCTTCGTCGCCGCCATGGCCAATTTCCTCAACTACGACGTCTACGACATCAATATATCAAGAATTTCAACCGATTCGGATCTCAAATCCCTCCTACTCCAAACAACACCGAAATCAATCATCGTCGTTGAAGATCTCGATCGGTTTCTCGCGGAGAAATCATCTACAGCAGTAACTTCATCGGGAATACTAAACTTCATGGACGGAATTTGGAGCGGCGAAGAGAGAGTGATGGTGTCGACAATGAACAGTAAAGATAACGTGGATCCGAATCTTCTTCGTCCGGGTCGGGTGGATGTACATATCCATTTTCCACTTTGCGATTTTTCATCATTCAAAACACTTGCTAGTAACTACCTTGGTGTAAAGGATCATAAACTGTTTCAACAAGTTCAGGAAATATTTGAAAACGGAGCGAGTTTAAGTCCAGCGGAAATCGGTGAGTTGATGATCGCGAATCGGAACTCACCGAGTCGAGCAATTAAATCTGTTATAACTGCGTTGAAAACGGACGGTGATGGTAGAGGGTGTGGGTCGATCGAACGGCGTACGGGGAATGTTGATGATGACGTGGATGAGGGTGTACGTGATACGCGGAAATTGTACGGGTTTTTCAGATTGAAGGCTCCTGCTCCTCCTAGAAAATCTTCTTCGTCACCAAACAGTGCATTGGCAAGTCCGTTGCGAATTTGCGAGGAATGA 1410 0.4475 MVIFICSPIFFKIAILLFSIYAIHMIFETGLIHETKKLWRTIEDWFHVYQVFYVPELNDNMQHNNLYRKLSLYLHSLPSLQDSHLNNLVTSNTNQNDVVLSLAPNQTIHDHFLGATVFWFNQTQPNKTFTLKIRKLDKRRILRPYLQHIHAVVDEIENQGNRDLRLYMNAADFGRWRFVPFTHPSTFETIAMELDLKNRVKSDLESFLKGKQYYHRLGRLWKRSFLLYGPSGTGKTSFVAAMANFLNYDVYDINISRISTDSDLKSLLLQTTPKSIIVVEDLDRFLAEKSSTAVTSSGILNFMDGIWSGEERVMVSTMNSKDNVDPNLLRPGRVDVHIHFPLCDFSSFKTLASNYLGVKDHKLFQQVQEIFENGASLSPAEIGELMIANRNSPSRAIKSVITALKTDGDGRGCGSIERRTGNVDDDVDEGVRDTRKLYGFFRLKAPAPPRKSSSSPNSALASPLRICEE* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4065 469 PANTHER BCS1 AAA-TYPE ATPASE 14 430 - -
Mal3g4065 469 CDD AAA 222 342 - -
Mal3g4065 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 403 IPR027417 -
Mal3g4065 469 Pfam ATPase family associated with various cellular activities (AAA) 226 342 IPR003959 GO:0005524|GO:0016887
Mal3g4065 469 Pfam Domain associated at C-terminal with AAA 38 120 IPR025753 -
Mal3g4065 469 SMART AAA_5 221 344 IPR003593 -
Mal3g4065 469 Gene3D - 178 338 IPR027417 -
Mal3g4065 469 MobiDBLite consensus disorder prediction 446 469 - -
Mal3g4065 469 Gene3D - 339 405 - -
Mal3g4065 469 PANTHER BNAC04G00800D PROTEIN 14 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4065 Mal-Chr3 119282810 119284219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4065 217 340 Calmodulin-binding Proteins AT3G56690 30.000 7.72e-09 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4065 3 119282810 119284219 Mal3g4065 3 119282810 119284219 ECH
Mal5g1080 5 19173644 19175089 Mal3g4065 3 119282810 119284219 ECH
Mal3g4065 3 119282810 119284219 Mal2g1742 2 20904413 20905906 PCT