Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4051 ATGGGTTCAATAAGGCCCATGGTATGGAATGAAGAAGAGAAAACCATGGTTGGAGCTGTTCTTGGTGCTCCAGCTATGGATTTTTTGATAACAAACTGTTTATCAAATGAGAGGGTGTTAATTGCTGTTGGTGAAACTGTTGATTCTCTTCAAAACAAACTCTCTGATCTTGTTGAAAATTCATCATCCAATTTCAATTGGAACTACGCCATTTTCTGGCGACTTTCTCGGTCAAAATCTGGTGATTATGTTCTTTGTTGGGCAGATGGGTGTTGCAGAGAACCAGACGAAGAAGAACGTGGTGGTGGTGGAGTTGGAGAAACTCTCACTCTTTGCATGGAAGAAGAAGAAAGGATGAAGCAAAGTATGAGGAAGAGGGTTTTGCAGAAGTTGCATAGAGCTTTTGGTGGTTCAGATGAAGACAATTACGCTTTTGGCCTTGACCGTGTAACCGACACAGAGATGTTCTATTTAGCTTCTATGTACTTTTCTTTTCCAAAAGGGTATGGTGGACCCGGTAAGTGTTTTGCTACTGGTAAACATTTGTGGTTGAAATCTGTTTCTGATTACTGCGTTCGTTCTTTCTTGGCTAAATCTGCTGGTATTCAAACTGTTGTTTTAGTACCTACTGATTTTGGTGTTGTTGAGTTGGGTTCTGTTAGATTCTTACCTGAAAGTTTTGAATTGTTGAACACTGTTAAATCATTGTTTTCAATTTCAAAATCCACCATACAAACATCATCATTGTATCCTAGGGTGATCAATGAGAGAAGAGATGAAGAAAGTGCAGTTTCAAATTCAAATGGAGTTCAAGTTCCAAAGGTTGTGTTGAATTTGAATAATGGTCGTTCACATTTTAGGGAGAAACTTGCTATTAGGAAAATGGATCATAATAATAATAATAATAATAATAATGTTAATAGCATTAACTTTCCTAGTGCTAGAAATGGTATTTGTGGTTCTAGTTGGGGAGTGAATCAAGGTCAAGGTGAAATTTTTGCTTCTAATGGTGTGAGAAAGGATTTTAGGCTTAACAACAATAGCAACTATCAACCACAAAGGCAGATGCAAATGCAAATTGACTTTTCGGGAGCGAATACGAGGGCTAATTCTGTGAGACCGGTTATTGCTGAACCGGAACTTGTTGCTGATGTTGAGGCTGATCAACCTAGTGACGAAAGGAGACCTAGAAAGCGCGGAAGGAAGCCTGCTAATGGAAGGGACGAACCGCTCAATCATGTGGAGGCAGAGAGACAAAGGCGCGAGAAGCTAAATCAGCGTTTTTACGCCTTAAGAGCTGTTGTGCCGAATATTTCCAAGATGGACAAGGCATCTTTACTTGGTGATGCTATTGCTTACATCAACGAGCTTCAAGCGAAACTCAAGATCATGGAGTCTGAGAGAGAGACATTTGGAAGCAGTACTTCGAGGGATGGATTGGACAACTCGAGATCAGAAAATCGTCATCAGAATACTAAAGTTCCTCCTCCTGATGTGGATATTCAAGCTTCTCAAGATGAGGTGCTTGTAAAAGTAAGTTGTTCTCTTGATACTCATCCTGTTTCAAAAGTAATAGAAATATTCAAAGAGGCACAAATCAGTGTTGTAGAGTCAAAACTCGCTGCTGCGAATGATGCTATCTGCCATACTTTTGTAATTAAGTCACAAGGATCTGAACAGCTTACCAAGGACAAGTTGATTGCAGCATTTTCCCAAGAATCCAACTCCTTACAAACCCAAACTTTGTCCATATAG 1755 0.3972 MGSIRPMVWNEEEKTMVGAVLGAPAMDFLITNCLSNERVLIAVGETVDSLQNKLSDLVENSSSNFNWNYAIFWRLSRSKSGDYVLCWADGCCREPDEEERGGGGVGETLTLCMEEEERMKQSMRKRVLQKLHRAFGGSDEDNYAFGLDRVTDTEMFYLASMYFSFPKGYGGPGKCFATGKHLWLKSVSDYCVRSFLAKSAGIQTVVLVPTDFGVVELGSVRFLPESFELLNTVKSLFSISKSTIQTSSLYPRVINERRDEESAVSNSNGVQVPKVVLNLNNGRSHFREKLAIRKMDHNNNNNNNNVNSINFPSARNGICGSSWGVNQGQGEIFASNGVRKDFRLNNNSNYQPQRQMQMQIDFSGANTRANSVRPVIAEPELVADVEADQPSDERRPRKRGRKPANGRDEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKIMESERETFGSSTSRDGLDNSRSENRHQNTKVPPPDVDIQASQDEVLVKVSCSLDTHPVSKVIEIFKEAQISVVESKLAAANDAICHTFVIKSQGSEQLTKDKLIAAFSQESNSLQTQTLSI* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4051 584 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 408 457 IPR011598 GO:0046983
Mal3g4051 584 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 7 575 - -
Mal3g4051 584 MobiDBLite consensus disorder prediction 468 500 - -
Mal3g4051 584 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 411 471 IPR036638 GO:0046983
Mal3g4051 584 MobiDBLite consensus disorder prediction 380 419 - -
Mal3g4051 584 CDD bHLH_AtAIB_like 405 469 - -
Mal3g4051 584 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 50 237 IPR025610 -
Mal3g4051 584 MobiDBLite consensus disorder prediction 387 419 - -
Mal3g4051 584 Pfam Helix-loop-helix DNA-binding domain 412 458 IPR011598 GO:0046983
Mal3g4051 584 Gene3D - 402 472 IPR036638 GO:0046983
Mal3g4051 584 SMART finulus 414 463 IPR011598 GO:0046983
Mal3g4051 584 PANTHER MYC 7 575 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4051 Mal-Chr3 119148587 119150341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4051 7 583 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 47.967 4.48e-177 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal3g4051 bHLH-MYC_N 2.5e-51 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4051 - - cam:101513355 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4051 3 119148587 119150341 Mal3g4051 3 119148587 119150341 ECH
Mal3g4051 3 119148587 119150341 Mal5g1119 5 19927345 19929216 PCT