Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4031 ATGGAACAAGAAAAGAGCCGCCATAGAATGTATAACCTATTCGTGAAGCACTTGAACGGTAAAACCCTAACCCTATTGTTCCCTTCTCCGATCCTTTCCGCAACTTCAATCAAAGATCGTCTCTTCCATCTCACCGGAATCCCAATCCAACACCAACGCCTCGTCACCGGTTGCCGCCACCTCAACGACGATAATTCCGCGATATGTTGTTCACCGGAAGATGGAAACATGTTCCCCTCCGTTCGTCTTCTTCTTCGTCTCAAAGGCGGGAAAGGAGGATTCGGATCGTTGCTGCGTGGAGCAGCGACGAAAGCGGGGCAGAAAAAGACGAACAATTTCGACGCGTGTAGGGATATGAGTGGGAGAAGATTGAGACATGTTAATGCGGAGAAGAGGTTGGAAGAGTGGAGAGAGGGTGAAGAGGAGAGAAAGCTTGAGAAAGTTGCGGAAGAGTTTTTGAAGAAACAGATGAAGAAGAATAATAAGGGGAAGGGGAAGAATGGTGATGTTGAGGCTCAGAAGTATGTTGCTAAGTATAGGGAACAATCTGAACGTTGTGTTGCGGAAGTTGCTGAGTCTGTTCAGGATTCTATCAGAAATTTTAAGCGCAAATCTTCGCCCATTTCAGAAGGTTCCCTTTCCCATGATCAGAAGAAGTTGAAGATTTGGATGGGGAAGAGGGCATTGAATGAAAGCGACGATAGTGATGATTCTGATGAAGATGTTAACGACGATGAGGGGGAAACTGAGAAATCTGTTTTGTTAAATAGTCAGAATGGGTCTGGGTTAAATAAAGCTGAAGATAGTTCTGATTCTGTGACTGGTCTGAAGCGGGATGGAGACTCTTCAGTGGTCGGTTCGTGTGAGAGTGGATCTGAAGAAGAGAAGGAAACTGTTGTAGAAGAAGGCAAAGTGGAAACTGTTGAAGGATTCCAGGGTAGTGAAACTATTGAGGCAAAACTGAGTATTGCTGCGGAACCCATGGTAAATGATGAGATGATAGAAGCTAATGTTGTGCCTTGTTCAGAGACCTTGGATTCTGGAATTAGTGTTCAGGATAATGATTTTCAGGATTACAAGGTTGATGGCACTGGTGCTCAAGCCTCAAATATTGTGAGCTCTGAAATTGTGGCCAATGACATGGAAATTGATGGTTCTCTTCAGCATAAAACAGCGGTCATTGAAGAAAGCTTGCCAAGCACTAGTGTTCCAGCAAAGGAGGAGCCTCTGAATTTTGATGCTTTTAATTCAGCTGCAGAACTTGAGGTTCTTGGCTTGGAAAATTTGAAGACTGAACTCCAGTCACGTGGGTTAAAATGTGGAGGTACTTTGCAGGAGCGGGCTGCAAGGCTTTTTCTTTTAAAATCGACTCCCCTAGATAAACTTCCCAAGAAACTGCTAGCAAAGAAATGA 1413 0.4444 MEQEKSRHRMYNLFVKHLNGKTLTLLFPSPILSATSIKDRLFHLTGIPIQHQRLVTGCRHLNDDNSAICCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWREGEEERKLEKVAEEFLKKQMKKNNKGKGKNGDVEAQKYVAKYREQSERCVAEVAESVQDSIRNFKRKSSPISEGSLSHDQKKLKIWMGKRALNESDDSDDSDEDVNDDEGETEKSVLLNSQNGSGLNKAEDSSDSVTGLKRDGDSSVVGSCESGSEEEKETVVEEGKVETVEGFQGSETIEAKLSIAAEPMVNDEMIEANVVPCSETLDSGISVQDNDFQDYKVDGTGAQASNIVSSEIVANDMEIDGSLQHKTAVIEESLPSTSVPAKEEPLNFDAFNSAAELEVLGLENLKTELQSRGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4031 470 Pfam Replication stress response SDE2 C-terminal 401 469 - -
Mal3g4031 470 MobiDBLite consensus disorder prediction 252 270 - -
Mal3g4031 470 SUPERFAMILY Ubiquitin-like 7 77 IPR029071 -
Mal3g4031 470 PANTHER SPLICING FACTOR SF3A-RELATED 10 469 - -
Mal3g4031 470 CDD Ubl_ubiquitin_like 13 78 - -
Mal3g4031 470 Gene3D - 3 92 - -
Mal3g4031 470 Pfam Silencing defective 2 N-terminal ubiquitin domain 11 157 IPR024974 -
Mal3g4031 470 ProSiteProfiles Ubiquitin domain profile. 11 92 IPR000626 GO:0005515
Mal3g4031 470 Coils Coil 416 436 - -
Mal3g4031 470 PANTHER REPLICATION STRESS RESPONSE REGULATOR SDE2 10 469 - -
Mal3g4031 470 MobiDBLite consensus disorder prediction 228 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4031 Mal-Chr3 118963933 118966212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4031 394 469 C2H2 Transcription Factor Family AT5G06160 44.737 2.33e-11 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4031 3 118963933 118966212 Mal3g4031 3 118963933 118966212 ECH