Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3999 ATGGCATTTTTCTCTGGATTTCAGCGCTTGCGTCGCCACTCTCAATCGCCACTTCTTAGCTCACATTTCACTTCGATTCGTCTCAATTCAACTCTCACTTCCCCCAAACTTTTCATCAGCGGTCTTTCAAGACTAACAACAGATGAAAAACTTACGGAAGCATTTTCTCCTTTTGGGGAGCTGTTGGAAGCTAAGGTGATAACTGATAGAGCCTCTGGAAGATCAAAGGGTTTTGCTTTTGTATCTTATGCAACCGTAGAAGAAGCTGAGAAGGCAAGAGAAGGAATGAATGCTAAATTTTTGGATGGTTGGGTTATATTTGTTGATCCTGCGAAACCAAGAGAACCCAGACCACCTCAGCAATCAGAATCGCAGCCGTCTCAAACAGGCTTCACAGTTAATAAGACCGTTGGGTGGTGTGGTTGA 426 0.439 MAFFSGFQRLRRHSQSPLLSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGELLEAKVITDRASGRSKGFAFVSYATVEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSESQPSQTGFTVNKTVGWCG* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3999 141 MobiDBLite consensus disorder prediction 121 135 - -
Mal3g3999 141 MobiDBLite consensus disorder prediction 111 141 - -
Mal3g3999 141 PANTHER NUCLEOLAR PROTEIN 8 1 141 - -
Mal3g3999 141 SMART rrm1_1 36 109 IPR000504 GO:0003723
Mal3g3999 141 SUPERFAMILY RNA-binding domain, RBD 34 134 IPR035979 GO:0003676
Mal3g3999 141 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 113 IPR000504 GO:0003723
Mal3g3999 141 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 141 - -
Mal3g3999 141 Gene3D - 25 135 IPR012677 -
Mal3g3999 141 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 103 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3999 Mal-Chr3 118475654 118477558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3999 37 128 Eukaryotic Initiation Factors Gene Family AT3G16380 34.737 1.97e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3999 - - gmx:100306326 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3999 3 118475654 118477558 Mal3g3999 3 118475654 118477558 ECH