Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3998 ATGACGTCATTCTTGAAGCCTGAGAATGCTCTCAAAAGGGCTGAAGAGTTGATCAATGTCGGGCAGAAGCAGGATGCGCTGCAGACTCTGCACGATCTTATCACTTCGAAAAGATACCGAGCATGGCAGAAAACACTCGAGAGGATTATGTTTAAGTATGTTGAGCTTTGTGTTGACATGAGGAAAGGCCGGTTTGCTAAGGATGGGCTTATTCAGTATCGGATTATATGTCAGCAAGTGAATGTCAGTTCACTGGAGGAGGTGATTAAGCATTTTATGCATCTGTCAACTGAGAAAGCTGAACAAGCCCGTAGCCAGGCTCAGGCATTGGAAGAAGCCCTTGATGTCGATGACTTGGAGGCAGATAAAAGGCCAGAGGACTTGATGCTGAGCTATGTCAGTGGTGAAAAAGGAAAGGATAGATCTGATCGGGAGCTTGTTACCCCATGGTTTAAATTTCTCTGGGAAACTTACAGGACAGTGCTTGAAATACTGCGGAACAACTCCAAATTGGAAGCCTTATATGCTATGACAGCCCATCGAGCTTTCCAGTTTTGTAAGCAGTATAAGCGAACAACAGAATTTCGCAGACTCTGTGAAATCATCAGAAACCATTTGGCTAATCTTAACAAATATCGTGACCAACGAGACCGACCTGACCTTTCTGCTCCTGAAAGCTTGCAATTGTATCTTGATACAAGATTTGAGCAGCTGAAAATTGCCACTGATCTTGAACTCTGGCAGGAAGCCTTCAGATCTGTTGAAGATATTCATGGATTAATGTGCATGGTCAAGAAAACACCAAAACCTTCCTTGATGACTGTTTACTATGTTAAGTTGACCGAAATATTTTGGAAATCTTCAAGTCATTTATATCATGCTTATGCATGGTTTAAGCTCTTCTTGTTACAGAAAAGCTTCAACAAAAATCTGAGTCAAAAGGATTTGCAATTAATAGCTTCATCTGTTGTTCTAGCTGCACTCTCAGTGCCTCCTCATGATCGCACTCACGGTGCATCTCATTTAGAACTAGAGCATGAAAAGGAGCGAAATTTGAGGATGGCTAATCTCATAGGCTTTAATCTTGAAACTAAGCCTGATAGCAGAGAAGTGCTCTCAAGGTCATCACTTCTTGCTGAACTGGCATCAAAGGGTGTAATGTCTTGTGTTTCACAAGAAGTGAAAGACATTTACTATCTCTTGGAAAATGAATTTCTACCCTCGGATCTTGCACTAAAAGTACTACCCTTGCTTAATAAAATTTCAAAATTAGGGGGTAAGTTTACCTTTGCTTCATCGGTTCCAGAGGTGCAATTCTCTCAGTATGTCCCGGCACTTGAAAAGTTAGCTACCTTGAGGTTGCTACAACAGGTGTCTAATGTGTACCAATCAATGAAGATTGAGAACTTAGCTGGGATGATCCCTTTCTTTGATTTTTCCGTCGTGGAAAAGATTTCTGTAGATGCTGTTAAGCAGAAGTTTCTATCAATGAAAGTCGACCACATGAAAAATGTTGTAATTTTCTGTAAGACGAGTCTCGAGGCTGATGGCTTGAGGGATCACTTGGCTAGTTTTGCTGAACAATTGAATAAGGCGAGGCAAATGATTTCTCCTCCTGATAGGAAACAATCAAAACTTGGAGCATTGCTCCCGGCTTTGTCAGAGGTTGTGGCCAAAGAACACAAGAGGCTCCTTGCTCGAAAATCCATTATTGAGAAGAGGAAAGAGGAACAAGAAAGGCAACTTCTTGAAAAGGAACGTGAGGAGGAGTCTAAGCGGTTGAGACTGCTGAAAATTGATGAAGAAGCAGAGCAAAGGCGGCTTGCAACTGAGATTGAGCAGAGGAAAATGCAAAGGATTCAAAGGGAAAAGGAGGAAAGAGAAAAAGAAGAAGCTCTGGCTTTACTTCAGGAAGCTGAAAAGCGTATTAAAGGGGTAAAAAGGGGCAAAAAGCCCATGATAGATGGGGGCCAAATTACTAGGGATTCCTTGATGCAGTTGACGATGGCCGAACAACTCCGGGAGAGACAAGAGATGGAGAAGAAACTGCAGAAATTGGCCAAAACCATGGATTATTTGGAAAGAGCAAAGAGAGAAGAGGCTGCTCCACTAATTGAAGCTGCATATCAACAGCGCCTTGTGGAAGAGAGGATTCTTCATGAGCGTGAGCAACAACAAGAGGTTGAACTAAGCAAACAGCGCCATGCTGGAGATCTCAATGAGAAGGAGAGGCTTAGCCGAATGATGGGCAATAAAGAGATATATCAAGAGAGAGTTGTCAGTCACCGCGAAGCGGAATTCCGTAGACTGGGGAGAGAAAGGGAGGAACGAATCTCAAGGATTTTACTCTCCAGGAAACAAGAGAGGGAAAAAATGAGAAAATTGAAGTATTATCTTAAGGTGGAAGAAGAGAGAAGACAGAAATTGCGTGAGGAGGAAGAAGCTCGGGAGCGTGAAGAGGCTGAGAGAAAAAAGAAGGAACAGGCTGAACGCCAAGCAAAATTGGATGAGATAGCTGAAAAGCAGAGACAAAGGCTAAGAGAAATTGAAGAAAAGGCTGAGAGAGAAAAGAGGGAAGCATTGTTGGGCAGACCTACTGAACCAGCTCTGAGGCCCTATGAGCCTCCTGCCCGTTCAGTGGATGCTGGTACTGCTCCTGCTGCAGCTGCAGCATCCCCAGCCCCAGCTCCAGGGAAATATGTTCCCAAGTTCCGGCGAGGAGGAGCTGAAACCACAGGAGCTGCTCCTCCAGAAGCAGATCGTTGGGGTAACAGTAGCAGCAGGCCGGATGGTGACAGGTGGGATCGCAATTCTTCCTCATTTGGTTCTGGTGGAGGTTCAAGGTCATCTTCAACTTGGTCATCTTCCAGGGTTTCACGTGATCGTACTTGA 2892 0.4405 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATDLELWQEAFRSVEDIHGLMCMVKKTPKPSLMTVYYVKLTEIFWKSSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPDSREVLSRSSLLAELASKGVMSCVSQEVKDIYYLLENEFLPSDLALKVLPLLNKISKLGGKFTFASSVPEVQFSQYVPALEKLATLRLLQQVSNVYQSMKIENLAGMIPFFDFSVVEKISVDAVKQKFLSMKVDHMKNVVIFCKTSLEADGLRDHLASFAEQLNKARQMISPPDRKQSKLGALLPALSEVVAKEHKRLLARKSIIEKRKEEQERQLLEKEREEESKRLRLLKIDEEAEQRRLATEIEQRKMQRIQREKEEREKEEALALLQEAEKRIKGVKRGKKPMIDGGQITRDSLMQLTMAEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERILHEREQQQEVELSKQRHAGDLNEKERLSRMMGNKEIYQERVVSHREAEFRRLGREREERISRILLSRKQEREKMRKLKYYLKVEEERRQKLREEEEAREREEAERKKKEQAERQAKLDEIAEKQRQRLREIEEKAEREKREALLGRPTEPALRPYEPPARSVDAGTAPAAAAASPAPAPGKYVPKFRRGGAETTGAAPPEADRWGNSSSRPDGDRWDRNSSSFGSGGGSRSSSTWSSSRVSRDRT* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3998 963 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 963 IPR027512 GO:0005852
Mal3g3998 963 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Mal3g3998 963 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Mal3g3998 963 MobiDBLite consensus disorder prediction 804 963 - -
Mal3g3998 963 Coils Coil 669 699 - -
Mal3g3998 963 MobiDBLite consensus disorder prediction 804 864 - -
Mal3g3998 963 SMART PINT_4 441 532 IPR000717 -
Mal3g3998 963 Coils Coil 792 859 - -
Mal3g3998 963 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 908 - -
Mal3g3998 963 Gene3D UVR domain 217 268 - -
Mal3g3998 963 Coils Coil 561 600 - -
Mal3g3998 963 Gene3D - 269 342 - -
Mal3g3998 963 Gene3D - 353 508 - -
Mal3g3998 963 Pfam PCI domain 373 508 IPR000717 -
Mal3g3998 963 Coils Coil 610 649 - -
Mal3g3998 963 MobiDBLite consensus disorder prediction 936 957 - -
Mal3g3998 963 Coils Coil 93 120 - -
Mal3g3998 963 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 908 IPR027512 GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3998 Mal-Chr3 118462549 118468840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3998 1 957 Eukaryotic Initiation Factors Gene Family AT4G11420 71.354 0.0 1276