Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3991 ATGGCGGCGTCACGGCGGCTCCGTGAACTCCAATCCGAACCTTCAAACAAGATCTGCGTCGACTGTTCCCAAAAGAATCCACAATGGGCCTCCGTTTCCTACGGCGTTTTCATGTGTCTCGAATGCTCCGGCAAACACCGTGGCCTCGGCGTTCACATCTCCTTCGTCCGATCCGTTACAATGGACTCATGGTCCGATCTCCAGATCAAGAAAATGGAAGCCGGTGGTAACCGCAATCTCAACACCTTCCTTTCTCAATACGGAATCCCTAAGGAAACTGACATCGTCACCAAGTATAATTCAAACGCCGCTTCGATCTACCGCGATCGCATTCAAGCGATAGCAGAAGGTCGTTCGTGGCGTGATCCACCGGTTGTTAAGGAGAATGCTAGTACTCGTGCTGGTAAGGGGAAGCCGCCTCTGGCTTCTTCTAATGGTGGTGGTTGGGATGATAATTGGGATAATGATGATGGTGATGGTTATGGATCACGTGGTGTTGGTGATATTCGAAGGAATCAGAGTACTGGTGATGTAATTGGATTTGTTGGAAGTGGAGTTACCCCGTCGTCGAGGTCGAAATCGACGGAGGATATTTACACGAGGACGCAATTGGAGGCTTCTGCTGCGAATAAGGAAGGATTCTTTGCCAAGAAGATGGCGGAGAATGAATCGCGACCGGAGGGGCTTCCTCCGTCGCAGGGTGGGAAGTATGTTGGGTTTGGATCTAGTCCGGGTCCTGCTCAGAGGATTCCTCCTCAAAATGATTATTTATCTGTTGTTTCTGAGGGAATTGGTAAATTGTCGATGGTTGCTCAGTCTGCAACCAAGGAGATCACTGCCAAGGTAAAGGACGGTGGTTATGATCACAAGGTCAATGAAACTGTCAATATTGTTACTCAGAAGACATCAGAGATTGGACAAAGGACATGGGGTATAATGAAAGGGGTCATCGCATTGGCCTCACAAAAGGTTGAGGAGCTCACCAAAGATTACCCGAATGGAAATTCTGATAACTGGCAACGAAATGAAAACGATAGACAAGATTTCAATCAAGAGAATAAAGGCTGGAATTCTTCTACTAGAGAAGGACAACCTTCATCAGGTGGACAAACTAATACTTATCACTCAAACTCCTGGGATGATTGGGACAATCAAGATACAAGGAAGGAAGAACCAGCTAAAGGATCAACTCCTCATAAGAATGATGATTGGGCTGGTTGGGATGATGCCAAAGATGATGATGATGAATTTGATAATAAATCTTTTGGTCATAATGGGACATCAAGTTCTGGCTGGACAGGAGGAGGATTTCACTAA 1317 0.4655 MAASRRLRELQSEPSNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDLQIKKMEAGGNRNLNTFLSQYGIPKETDIVTKYNSNAASIYRDRIQAIAEGRSWRDPPVVKENASTRAGKGKPPLASSNGGGWDDNWDNDDGDGYGSRGVGDIRRNQSTGDVIGFVGSGVTPSSRSKSTEDIYTRTQLEASAANKEGFFAKKMAENESRPEGLPPSQGGKYVGFGSSPGPAQRIPPQNDYLSVVSEGIGKLSMVAQSATKEITAKVKDGGYDHKVNETVNIVTQKTSEIGQRTWGIMKGVIALASQKVEELTKDYPNGNSDNWQRNENDRQDFNQENKGWNSSTREGQPSSGGQTNTYHSNSWDDWDNQDTRKEEPAKGSTPHKNDDWAGWDDAKDDDDEFDNKSFGHNGTSSSGWTGGGFH* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3991 438 MobiDBLite consensus disorder prediction 422 438 - -
Mal3g3991 438 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Mal3g3991 438 MobiDBLite consensus disorder prediction 125 159 - -
Mal3g3991 438 CDD ArfGap_ArfGap1 3 117 - -
Mal3g3991 438 Gene3D Arf GTPase activating protein 1 132 IPR038508 -
Mal3g3991 438 MobiDBLite consensus disorder prediction 381 407 - -
Mal3g3991 438 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Mal3g3991 438 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Mal3g3991 438 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Mal3g3991 438 SUPERFAMILY ArfGap/RecO-like zinc finger 5 114 IPR037278 -
Mal3g3991 438 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Mal3g3991 438 Pfam Putative GTPase activating protein for Arf 5 101 IPR001164 GO:0005096
Mal3g3991 438 MobiDBLite consensus disorder prediction 329 438 - -
Mal3g3991 438 MobiDBLite consensus disorder prediction 351 380 - -
Mal3g3991 438 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 437 - -
Mal3g3991 438 MobiDBLite consensus disorder prediction 222 252 - -
Mal3g3991 438 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 437 IPR044519 GO:0005096|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3991 Mal-Chr3 118391525 118393785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3991 5 87 C2H2 Transcription Factor Family AT4G05330 48.810 5.89e-23 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3991 3 118391525 118393785 Mal3g3991 3 118391525 118393785 ECH