Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3977 ATGGCATCACCTCAAAACTTTGTATCCAAGCTAACAGCACTGGTTGTGGATGACAATATAATCAACCGAAAGATTCATCAAAAGATGTTGAATCAATTTGGAGTCAAAAGTCAAAGTGTGGAGAATGGAAAAGAAGGAGTGGACATTCATTGGTGTGGGCAAAAATTTGACCTAATTCTCATGGACATGGATATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGCGCAATGGGTATTTGTAGCACTATTGTTGGTGTGTCATCACGCTGTATGGAAGATGAAATACAAAAATTTATGGAAGCTGGATTGGATGAATATCAAGAGAAACCCTTGAACAATGCAATACTTGGTTCCATTCTTGACAAAATCAATCCAACCGTGTGA 393 0.3868 MASPQNFVSKLTALVVDDNIINRKIHQKMLNQFGVKSQSVENGKEGVDIHWCGQKFDLILMDMDMPIMNGIEATKELRAMGICSTIVGVSSRCMEDEIQKFMEAGLDEYQEKPLNNAILGSILDKINPTV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3977 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 128 - -
Mal3g3977 130 Gene3D - 1 128 - -
Mal3g3977 130 SUPERFAMILY CheY-like 9 125 IPR011006 -
Mal3g3977 130 CDD REC_hyHK_CKI1_RcsC-like 14 123 - -
Mal3g3977 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 128 - -
Mal3g3977 130 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
Mal3g3977 130 Pfam Response regulator receiver domain 14 119 IPR001789 GO:0000160
Mal3g3977 130 SMART REC_2 11 123 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3977 Mal-Chr3 118157578 118158799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3977 11 117 Response Regulator Gene Family AT3G04280 45.872 4.90e-27 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal3g3977 Response_reg 5.9e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3977 - - gmx:100794931 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3977 3 118157578 118158799 Mal3g3977 3 118157578 118158799 ECH