Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3968 ATGGAAAATTTGTTCCGTCTAGCTGATCACCAAGACTTTCTCTCACGCCGTTGCATTTGGGTCAATGGACCTGTGATCATAGGTGCAGGTCCATCCGGTCTTGCAACGGCAGCATGTCTTAGAGAACAAGGAGTGCCCTTCATTGTTCTTGAAAGAGCTGATTGCATAGCATCACTATGGCAAAAAAGAACCTATGACAGATTGAAGCTTCACCTTCCAAAACAATTCTGTCAACTACCTAACCTTCCAATGCCTGATGATTTCCCTGAATACCCTTCAAAGAAACAGTTCATAAACTACCTTGAAAACTATGCTAACAAATTTGAAATCAACCCGCAATTCAACGAGTGTGTTCAATCTGCTAAGTATGAAGAAACCAGTGGATTGTGGAGAGTTAAGACCAATGAAGTTGAGTATATTTGTAGGTGGCTTGTTGTTGCTACCGGCGAAAATGCTGAGTGTATTACTCCTGAAATTGAAGGACTTTCTCAATTCAAAGGTGAAGTTGTTCATGCTTGTGATTATAAGTCAGGGGAAAATTTTGAAGGAAAGAAAGTTCTTGTTGTTGGATGTGGAAATTCTGGAATGGAACTCTCACTTGATCTTAGCAATCATCATGCTTTACCTTCAATGGTTGTTCGTAGCTCGGTTCATGTGTTACCAAGAGAAATATTTGGAATATCAACTTTTGAATTAGCGGTTATGATGTTGAAGTGGTTACCACTTTGGATTGTTGACAAGCTTTTATTGATCTTGACATGGTTTATTTTGGGTGACATAGAAAAATATGGTATCAAAAGGCCTTCAATGGGTCCTTTGCAGCTGAAAAACACCAAGGGAAAGACACCGGTTTTGGACATTGGTGCCTTGGAAAAAATTAGATCCGGTGATATAAATGTTGTACCTGGAATCAAGAGGTTTAATAATAATGGTGAAGTTGAGCTTGTTAATGGTGAAATGCTTGATGTGGATGCGGTTGTTCTTGCTACCGGATACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCCAAGAATGGATACCCAAAGATGCCATTTCCACATGGTTGGAAAGGAAATTCAGGACTTTATGCTGTTGGGTTCACAAAGAAAGGGCTTTCTGGTGCTTCATCTGATGCTCTTAAAATTGCACAAGATATTGGAAAAGTTTGGAAACAAGAGACAAAACAAAACAAGCAACGCAATACTGCTTGTCATAGACGTTGCATTTCACAATTCTAA 1251 0.3965 MENLFRLADHQDFLSRRCIWVNGPVIIGAGPSGLATAACLREQGVPFIVLERADCIASLWQKRTYDRLKLHLPKQFCQLPNLPMPDDFPEYPSKKQFINYLENYANKFEINPQFNECVQSAKYEETSGLWRVKTNEVEYICRWLVVATGENAECITPEIEGLSQFKGEVVHACDYKSGENFEGKKVLVVGCGNSGMELSLDLSNHHALPSMVVRSSVHVLPREIFGISTFELAVMMLKWLPLWIVDKLLLILTWFILGDIEKYGIKRPSMGPLQLKNTKGKTPVLDIGALEKIRSGDINVVPGIKRFNNNGEVELVNGEMLDVDAVVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNSGLYAVGFTKKGLSGASSDALKIAQDIGKVWKQETKQNKQRNTACHRRCISQF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3968 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 181 205 - -
Mal3g3968 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Mal3g3968 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 142 150 - -
Mal3g3968 416 SUPERFAMILY FAD/NAD(P)-binding domain 25 292 IPR036188 -
Mal3g3968 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 185 203 - -
Mal3g3968 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 141 159 - -
Mal3g3968 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Mal3g3968 416 SUPERFAMILY FAD/NAD(P)-binding domain 183 393 IPR036188 -
Mal3g3968 416 Pfam Flavin-binding monooxygenase-like 26 337 IPR020946 GO:0004499|GO:0050660|GO:0050661
Mal3g3968 416 Gene3D - 23 402 IPR036188 -
Mal3g3968 416 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 11 414 - -
Mal3g3968 416 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 11 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3968 Mal-Chr3 117968110 117969756 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3968 K11816 - gmx:100819987 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3968 3 117968110 117969756 Mal3g3968 3 117968110 117969756 ECH
Mal1g2592 1 35903338 35905280 Mal3g3968 3 117968110 117969756 PCT
Mal1g1376 1 17720049 17730326 Mal3g3968 3 117968110 117969756 PCT