Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3966 ATGGCTGCTGCTGTTGCTGCTAAACCTATAGTTGGGACCCATGTTTGGGTGGAGGATTCTGATGTAGCTTGGATAGATGGCGAGGTCTTGGAGGTTAATGGAGAACAAATCAAAGTCCTTTGTACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCCAATATTTTTCATAAAGATACTGAAGTTCCACCAAGTGGAGTGGATGATATGACAAAGCTCGCGTACCTGCACGAACCTGGAGTCCTAAATAATCTGAGATCAAGATATGATATCAACGAAATTTATACTTACACTGGGAATATATTGATTGCTGTGAACCCTTTCATAAAGCTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGAGCAGCTTTCGGCGAGCTAAATCCACACCCCTTTGCTGTTGCAGATGCAGCGTATAGGCTCATGAAAAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGAGCAGGTAAAACAGAAACTACTAAGTTACTCATGCGATATCTTGCTTACATGGGTGGGAGAGCTGCAGTTGGTGAAGGTAGAACTGTTGAGCAAAAAGTCCTCGAGTCAAATCCCGTCCTAGAAGCTTTTGGCAATGCAAAGACTGTCAGGAACAATAATTCGAGCCGTTTTGGTAAGTTTGTGGAGATTCAATTTGATCAAAAAGGAAGAATTTCGGGTGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGCCAGCTGTCAGATCCTGAGAGGAATTATCATTGTTTCTACATGCTCTGTGCTGCACCTGCAGAGGATGTTAAGAAGTACAAATTAGGACATCCAAGAACATTTCATTATCTGAATCAATCAAATTGCTATGAGTTGGAAGGGCTTGATGAATCTAAAGAATATAGCGCTATTAGGAGAGCAATGGATGTTGTTGGAATAAGTTTTGAGGATCAGGATGCAATATTTCAAGTTGTTGCTGCAATTTTGCATCTCGGGAACATTGAATTTGTGAAAGGTGAGGAGATAGATTCGTCTATGCCCAAAGATGAAAAGTCCCGGTTTCACCTACAGACTGCAGCTGAGCTTTTCATGTGTGATGCTAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGCGATGAAACAATAACAAAATGGCTGGATCCAGAAGCTGCTGCGCTCAGTCGAGATGCTCTGGCAAAGATTGTGTACACAAGATTGTTTGACTGGTTGGTTGATACCATAAATAATTCCATTGGTCAAGATCCCGAGTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGAATAACAGTTTTGAGCAGTTTTGTATTAACTTGACAAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAGGAAGAAATTGATTGGAGTTACATTGAATTTGTGGATAATCAAGATATTCTGGATCTGATTGAAAAGAAACCTGGTGGCATTATTTCGCTTTTGGACGAAGCATGTATGTTTCCTAGATCAACTCATGAAACTTTCTCCCAAAAGCTGTATCATACATTCAAAGACCATAAAAGGTTTAGCAAGCCCAAATTATCACCTAGTGACTTCACAATTTGCCATTATGCTGGCGATGTTACTTATCAAACTGAGTTCTTCCTTGACAAGAACAAAGATTATGTTGTTGCAGAACACCAGTCACTTCTTTATGCTTCCAAATGTCCCTTTGTATCAGGCTTGTTTCCCCCTTCACCCGAGGAAACTTCCAAACAATCAAAGTTCTCTTCAATAGGTTCCAGATTTAAGCAACAATTGCAATCTTTACTTGAAACTCTAAGCTCCACTGAACCACACTACATTCGATGTGTGAAACCCAATAATCTTCTTAAGCCGGCAATTTTTGAGAATAAAAATGTTTTGCAGCAACTGCGCTGTGGGGGAGTTATGGAGGCAATCAGGATTAGCTGTGCTGGCTATCCCACTAGAAAAGCCTTTGATGAATTTGTTGATCGATTTTCTCTGCTTGCTCCTGAAGCATTTGATGGAAGCTCTGATGAGGTCACTGCTTGCAAGAGGATCCTAAAGAATGTTCGGCTTGAAGGTTATCAGGTTGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGTGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTTCGCTCCTATTTGGCACGTCAAAGTTTCATTTCGCTTCGTTTGTCAGCTTTGCAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTTTGAGGGAATGCGGCGGGAGGCTTCTAGTCTGCTCATTCAAAGGTGTTTCCGCATGCATATTGCTAAGAAGGCGTACAAAGAGTTGTATGCCTCTGCTGTCTCCATCCAGACTGGTATGCGGGGGATGGCTGCTCGGTGTGAGCTTCACTCTAGAAGGAGGACTAGTGCAGCAATTATCATTCAGAGCCACTGCAGGAAATACTTGGCCCTACTTCATTTCGTGAAATTAAAGAAGGCGGCAATTGCAACACAATGTGCATGGAGAGGAAAAGTTGCCCGCCGAGAACTGCGGAAACTCAAGATGGCTGCAAGAGAAACAGGGGCTCTCCAAGATGCCAAAAATAAGCTAGAAAAACAAGTTGAAGACCTTACATTAAGATTGCAGCTGGAAAAACGTTTAAGGGTGGACGTGGAAGAGGCAAAAGCAAAAGAAAACGAAAAATTGCAGTCAGCTTTGCAAGAGATGCAACTTCAGTTCAAAGAAACTAAAGTACTTCTTGAAAAGGAGCGGGAGGCTACAAAAAGATTGGAGGAGAGAGTTCCTGTCATACAGGAGGTTCCAGTTGTTGACCATGCTTTGTTAGAGAAGCTAAGTAGCGAAAACGAGAAACTCAAGAACTTGGTGAGTTCACTGGAAAAGAAAATTGATGAAACAGAAAAAAGGTATGAAGAGGAAGCTAAAGTTAGTGAAGAAAGGTTGAAGCAAGTTTTGGATGCAGAATCAAAAGTAATCCAGATGAAGACTGCTATGCAAAGGCTCGAAGAGAAATTCGCAGACATGGAATTTGCAAACCATATTCTTCAGAAACAATCTCTGTTAAACTCGCCTGTGAAAACGACACTGGAGAACCTCTCTACCCCTGTATCTCAGAAGTTGGAAAATGGTCACCATGTGGCAGAAGAGCAGAATGATGCTGATACATATGTTACACCGGTGAAACAATTTGTAAACGAATCTGACTCGAAATTGAAGAGATCACAATCACACAGTGAACGTCATCATGGGAGTTTTGATTCACTTGTCAACTGTGTTAGTAAAAATATTGGGTTCAATCATGGAAAGCCTATTGCTGCATTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGATCTAGTGTATTTGATCGCCTTGTCCAGATGATTGGTTCTGCAATTAAGGATCAAGATGACAATGATCTTATGGCCTATTGGCTGTCAAATTTATCAGCATTATTGTTTTTACTTGAACAAAGCCTGAAATCTGGGAGTTCAACGAATGAAACTGCGGTTGGAAAACCGCCTAATCCGACATCCCTCTTTGGAAGAATGACTAAGAGTTTTCTTTCATCCCCTTCTTCTGCCAACCTTGCTTCTCCTTCATCAGTGGTTGTACGCAAGGTAGAGGCTAAGTACCCTGCTTTGCTTTTCAAGCAGCAACTCACAGCCTATTTGGAGAAAATATATGGCATCATTCGAGATAACTTGACGAAGGAGTTAACATCCGTTCTTGCACTATGTATCCAGGCACCAAGAACATCAAAGGGAGTATTACGATCTGGTCGATCCTTCGGTAAAGATTCCCCAATGGTTCACTGGCAGAGTATTATCGAATCCCTCAACACGCTTCTCTGTACACTGAAAGAGAACTTTGTGCCTCCAGTTCTTATCCGAAAGATCTTCAGTCAAACATTCTCATTTATTAACGTGCAACTCTTCAATAGCCTTCTAGTTCGTCCCGGTTGTTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAGTTAGAGCTTTGGTGCTGCCAAGCAAAGGAGGAGTATGCAGGATCGTCTTGGGATGAGCTCAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATCCATCAGAAGTATAGGATTTCCTATGATGAAATCGTTCATGATTTATGTCCTATCTTGAGTGTCCAGCAGCTATGTAAAATATGTACACTTTACTGGGACGATAACTACAATACACGAAGCGTATCACCACATGTCCTTGCGAGCATGAGGATGGACTTGGACTCCAATGATGTTCCGAGCGATTCTTTCTTGTTGGATGACAGTTCCAGCATTCCCTTCTCAGTGGATGACCTCTCTGCATCACTACAAGAGAAGGACTTCTCAGACATGAAACCAGCAGATGAACTTCTTGAGAATCCAGCCTTCCAATTTTTAAATGAGTAG 4545 0.4145 MAAAVAAKPIVGTHVWVEDSDVAWIDGEVLEVNGEQIKVLCTSGKTVVVKASNIFHKDTEVPPSGVDDMTKLAYLHEPGVLNNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAAFGELNPHPFAVADAAYRLMKNEGISQSILVSGESGAGKTETTKLLMRYLAYMGGRAAVGEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPAEDVKKYKLGHPRTFHYLNQSNCYELEGLDESKEYSAIRRAMDVVGISFEDQDAIFQVVAAILHLGNIEFVKGEEIDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDTINNSIGQDPESKSLIGVLDIYGFESFKNNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIISLLDEACMFPRSTHETFSQKLYHTFKDHKRFSKPKLSPSDFTICHYAGDVTYQTEFFLDKNKDYVVAEHQSLLYASKCPFVSGLFPPSPEETSKQSKFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKAFDEFVDRFSLLAPEAFDGSSDEVTACKRILKNVRLEGYQVGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSYLARQSFISLRLSALQIQAACRGQLARQVFEGMRREASSLLIQRCFRMHIAKKAYKELYASAVSIQTGMRGMAARCELHSRRRTSAAIIIQSHCRKYLALLHFVKLKKAAIATQCAWRGKVARRELRKLKMAARETGALQDAKNKLEKQVEDLTLRLQLEKRLRVDVEEAKAKENEKLQSALQEMQLQFKETKVLLEKEREATKRLEERVPVIQEVPVVDHALLEKLSSENEKLKNLVSSLEKKIDETEKRYEEEAKVSEERLKQVLDAESKVIQMKTAMQRLEEKFADMEFANHILQKQSLLNSPVKTTLENLSTPVSQKLENGHHVAEEQNDADTYVTPVKQFVNESDSKLKRSQSHSERHHGSFDSLVNCVSKNIGFNHGKPIAAFTIYKCLLHWKSFEAERSSVFDRLVQMIGSAIKDQDDNDLMAYWLSNLSALLFLLEQSLKSGSSTNETAVGKPPNPTSLFGRMTKSFLSSPSSANLASPSSVVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLTKELTSVLALCIQAPRTSKGVLRSGRSFGKDSPMVHWQSIIESLNTLLCTLKENFVPPVLIRKIFSQTFSFINVQLFNSLLVRPGCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIVHDLCPILSVQQLCKICTLYWDDNYNTRSVSPHVLASMRMDLDSNDVPSDSFLLDDSSSIPFSVDDLSASLQEKDFSDMKPADELLENPAFQFLNE* 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3966 1514 CDD MYSc_Myo11 78 723 IPR036018 -
Mal3g3966 1514 ProSiteProfiles IQ motif profile. 809 838 IPR000048 GO:0005515
Mal3g3966 1514 ProSiteProfiles IQ motif profile. 786 815 IPR000048 GO:0005515
Mal3g3966 1514 ProSiteProfiles IQ motif profile. 761 790 IPR000048 GO:0005515
Mal3g3966 1514 PANTHER MYOSIN 8 1512 - -
Mal3g3966 1514 Gene3D - 669 736 - -
Mal3g3966 1514 Coils Coil 880 960 - -
Mal3g3966 1514 Gene3D Myosin VI head, motor domain, U50 subdomain 315 604 - -
Mal3g3966 1514 CDD MyosinXI_CBD 1112 1483 IPR037975 GO:0007015
Mal3g3966 1514 PRINTS Myosin heavy chain signature 485 513 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 PRINTS Myosin heavy chain signature 199 226 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 PRINTS Myosin heavy chain signature 432 460 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 Coils Coil 975 1051 - -
Mal3g3966 1514 Pfam Myosin head (motor domain) 66 723 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 886 IPR027417 -
Mal3g3966 1514 Gene3D Kinesin motor domain 67 665 IPR036961 -
Mal3g3966 1514 Gene3D - 738 787 - -
Mal3g3966 1514 Gene3D - 835 885 - -
Mal3g3966 1514 Gene3D - 788 834 - -
Mal3g3966 1514 Pfam Myosin N-terminal SH3-like domain 11 54 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 Pfam IQ calmodulin-binding motif 835 853 IPR000048 GO:0005515
Mal3g3966 1514 Pfam IQ calmodulin-binding motif 764 781 IPR000048 GO:0005515
Mal3g3966 1514 Pfam IQ calmodulin-binding motif 740 758 IPR000048 GO:0005515
Mal3g3966 1514 Pfam IQ calmodulin-binding motif 789 807 IPR000048 GO:0005515
Mal3g3966 1514 Pfam IQ calmodulin-binding motif 859 878 IPR000048 GO:0005515
Mal3g3966 1514 Gene3D - 255 313 - -
Mal3g3966 1514 ProSiteProfiles IQ motif profile. 740 767 IPR000048 GO:0005515
Mal3g3966 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 788 IPR027417 -
Mal3g3966 1514 SMART MYSc_2a 58 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 Gene3D - 442 626 - -
Mal3g3966 1514 ProSiteProfiles Dilute domain profile. 1161 1462 IPR002710 -
Mal3g3966 1514 SMART DIL_2 1337 1444 IPR002710 -
Mal3g3966 1514 SMART iq_5 833 855 IPR000048 GO:0005515
Mal3g3966 1514 SMART iq_5 760 782 IPR000048 GO:0005515
Mal3g3966 1514 SMART iq_5 808 830 IPR000048 GO:0005515
Mal3g3966 1514 SMART iq_5 856 878 IPR000048 GO:0005515
Mal3g3966 1514 SMART iq_5 737 759 IPR000048 GO:0005515
Mal3g3966 1514 SMART iq_5 785 807 IPR000048 GO:0005515
Mal3g3966 1514 ProSiteProfiles Myosin motor domain profile. 64 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal3g3966 1514 Pfam DIL domain 1338 1441 IPR002710 -
Mal3g3966 1514 ProSiteProfiles IQ motif profile. 857 886 IPR000048 GO:0005515
Mal3g3966 1514 PANTHER MYOSIN-14 8 1512 - -
Mal3g3966 1514 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 10 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3966 Mal-Chr3 117903780 117916724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3966 9 1513 Myosins gene family AT5G43900 73.448 0.0 2289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3966 K10357 - gmx:100795648 2628.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3966 3 117903780 117916724 Mal1g2591 1 35823467 35841874 PCT