Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3960 ATGCCGCCGTCCGTCTTCTTCCTCTTTGCTCTTCTTAACTTCCTCCTCTCTTCCCAAGTGGAGTCATTTTCTCTGAGTATGTCGTTTGCTTCATTGGAACAAACGAAATTGTGGTTTGTTAAGCCTTCTTCTGCACCAACTTCTGCACCAGTGCCATCTCCATCCTATCAAGGTCCGAGTGTGACTCCAAAACACAAACATCATCATCGTCACCGACGCCATCATAGCACGAGACCTCCTTATGTAGTAGTTGCTCCACCCCCTTCCACAGACCCAGCTTGCGATCAAATATGTACGGATCCTCTCACATCAACTCCCTTTGGTTCACCCTGTGGTTGTGTATTTCCTATGAAAGTCAGACTTACACTGGATGTAGCTCCTTTTGCTGTTTTTCCAGTATTGAACGAGTTAGAGTATGAAGTTGCGCTAGGCACATATTTAGAACAGAGTCAGGTGAAGATAATGGGTGCAACTGCTGACAGTCAAAATCAGGGAAGAACTAGTGTCGATATTAACTTGGTTCCATTAGGAGAGAAATTTGACGACACAACTGCAGCCCTGACATACGAGAGGTTTTGGCACAAAAAAGTTCCTCTAAATAGGAGCCTTTTTGGTGATTATGCTCTCGTGTACATTACATATCCAGGACTTCCATCGTCACCACCATATGGAACTTCTATTGGGAGCGGTCCCAGTGCAAATGATGACGGTATTCTTCCAGTTAGCGCCAATTTTGATAGCAAGAACCAGAAAACGAATCTTAGAACCATAATCATCATTGCTTTGTCTTCTTTTGTGCTCTTGCTGGTTTTGATTGGAGCATTTTCTGTTACTTTGAAATGGAGGAAGACTAGGAGACCATCAAGTGCTGTTGGCCCAGCATTTACATCTTCTCTGAACAAGAGATCTGGCTTCGGGTCTATGCTGTCAAGCAGTATTACAAGCTCGACATCAATGTCCCTCATGTCCACGATGCCCACTTCCATTCTATCTGTTAAAACATTTTCACTTTCTGAGATTGAGAAAGCAACAGATAAGTTTAATACAAAGAGGGTATTAGGGGAAGGAGGATTTGGACGTGTGTATAGTGGGACATTGGAAGATGGGGCTGAAGTTGCAGTGAAGCTCCTTACAAGGGATAATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTCGAGATGTTAAGCCGTTTGCATCATCGCAATCTAGTGAAACTTATCGGTATATGCATTGAAGGGCGTAGGCGTTGCCTGGTGTATGAGCTTGTTCCTAATGGCAGCGTTGAGTCCCATCTGCATGGTGATGACAAGAATATGGGAGCTCTAGATTGGGAAGCACGGATGAAAATTGCCCTTGGAGCTGCGAGAGGATTGGCCTATCTTCATGAGGATTCCAATCCCCGTGTAATTCATCGAGACTTCAAAGCTAGCAATGTGTTATTAGAAGACGACTTTACCCCTAAAGTTTCTGATTTCGGTTTGGCAAGAGAAGCTACTGAAGGGAGTAATCATATTTCTACACGGGTGATGGGGACTTTTGGGTACGTTGCCCCAGAATATGCAATGACAGGCCATTTACTGGTTAAAAGTGATGTTTATAGTTACGGGGTTGTGCTTCTTGAACTTCTCACAGGCAGAAAACCAGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTTGTAACTTGGGCACGACCACTGTTGACTAGTAGAGAAGGTTTAGAACAGCTAGTGGATCCATCTTTGGCTGGAGGTTACAACTTTGATGACATGGCAAAGGTAGCAGCTATTGCGTCAATGTGTGTTCACTCCGAGGTCACACAAAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAATTGATATACAATGACACAGATGAGACTGGTGGAGATTATTGTAGTCAGAAGGACTCCTCTGCTCAGGAGTCTGATTTTAGAGGTGAGCTTGCCCCTTCTGATAGCAGTTGGTGGAATGGTGGAGGGTTAACGCCTCGATTAACATATGGACAAGCATCTTCCTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGATATGGAAAACAGACCGTTTTCAACTTCAAGCTTTAATGGAGATGAGCTATCTTTACCAATTAGGCATGGGAATAGATCAGGGCCATTAAGAACGATCCGAAGCAAGTTATCCTTATATAGATTTTCAGGAAGTCGGAGTGAGCATGGGGAAATTTCTTCTAAGCGAAGTTGGATTTGA 2241 0.4382 MPPSVFFLFALLNFLLSSQVESFSLSMSFASLEQTKLWFVKPSSAPTSAPVPSPSYQGPSVTPKHKHHHRHRRHHSTRPPYVVVAPPPSTDPACDQICTDPLTSTPFGSPCGCVFPMKVRLTLDVAPFAVFPVLNELEYEVALGTYLEQSQVKIMGATADSQNQGRTSVDINLVPLGEKFDDTTAALTYERFWHKKVPLNRSLFGDYALVYITYPGLPSSPPYGTSIGSGPSANDDGILPVSANFDSKNQKTNLRTIIIIALSSFVLLLVLIGAFSVTLKWRKTRRPSSAVGPAFTSSLNKRSGFGSMLSSSITSSTSMSLMSTMPTSILSVKTFSLSEIEKATDKFNTKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVPNGSVESHLHGDDKNMGALDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPLLTSREGLEQLVDPSLAGGYNFDDMAKVAAIASMCVHSEVTQRPFMGEVVQALKLIYNDTDETGGDYCSQKDSSAQESDFRGELAPSDSSWWNGGGLTPRLTYGQASSFITMEYSSGPLEDMENRPFSTSSFNGDELSLPIRHGNRSGPLRTIRSKLSLYRFSGSRSEHGEISSKRSWI* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3960 746 MobiDBLite consensus disorder prediction 62 78 - -
Mal3g3960 746 Pfam Protein tyrosine and serine/threonine kinase 349 620 IPR001245 GO:0004672|GO:0006468
Mal3g3960 746 SUPERFAMILY Protein kinase-like (PK-like) 324 623 IPR011009 -
Mal3g3960 746 CDD STKc_IRAK 353 623 - -
Mal3g3960 746 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 6 745 - -
Mal3g3960 746 MobiDBLite consensus disorder prediction 47 83 - -
Mal3g3960 746 PANTHER OS01G0750732 PROTEIN 6 745 - -
Mal3g3960 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Mal3g3960 746 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3960 746 Gene3D Transferase(Phosphotransferase) domain 1 424 645 - -
Mal3g3960 746 Gene3D Phosphorylase Kinase; domain 1 319 423 - -
Mal3g3960 746 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3960 Mal-Chr3 117854455 117859916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3960 97 629 Receptor kinase-like Gene Family AT5G56890 60.036 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mal3g3960 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3960 - - gmx:100792309 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3960 3 117854455 117859916 Mal3g3960 3 117854455 117859916 ECH