Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3952 ATGGCTAAGGAAAAAGTTCATATTAACATTATGTTTATTGGTCATGTCGGTTCTGGGAAGTCAACCATTGCTAGTCATTTGATCTACAAACTTGGAGGTATTGACAAGAGTGTCCTTGAAAGATTTGAGAAAGAAGCTGCTGAGAGTGTCAATGAGAAAGAAGTTGCTAAGATAAACAAGGATGCTTGGGCGATTGACAAGATCAAGTCTCACATTGAAAGAGGTATCACAATTGACAAGAGTGTCATTCAGAGAATTGAGATAGAAGCTGATAACCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGATCAACTCTGAGCGTGAAAGAGACATTAATCTGTCCAAGTTTGAGACAACCAAGTACCACTGCACTGTCATTGATGCCCCCGGACACATGGATTTATTTATTGAGACCATGCTCACAAGAACGTCCCAACCTGACTGTGTGGTTCTCGTCATTGATTCCACTACTTGA 477 0.4067 MAKEKVHINIMFIGHVGSGKSTIASHLIYKLGGIDKSVLERFEKEAAESVNEKEVAKINKDAWAIDKIKSHIERGITIDKSVIQRIEIEADNRSFKYAWVLDKINSERERDINLSKFETTKYHCTVIDAPGHMDLFIETMLTRTSQPDCVVLVIDSTT* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3952 158 PANTHER TRANSLATION FACTOR 1 82 - -
Mal3g3952 158 PANTHER TRANSLATION FACTOR 78 158 - -
Mal3g3952 158 Gene3D - 82 158 IPR027417 -
Mal3g3952 158 Coils Coil 39 59 - -
Mal3g3952 158 Gene3D - 1 81 IPR027417 -
Mal3g3952 158 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 82 - -
Mal3g3952 158 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mal3g3952 158 PRINTS GTP-binding elongation factor signature 125 135 IPR000795 GO:0003924|GO:0005525
Mal3g3952 158 Pfam Elongation factor Tu GTP binding domain 6 157 IPR000795 GO:0003924|GO:0005525
Mal3g3952 158 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 78 158 - -
Mal3g3952 158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 157 IPR027417 -
Mal3g3952 158 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 158 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3952 Mal-Chr3 117758541 117759017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3952 1 158 Eukaryotic Initiation Factors Gene Family AT1G07930 51.515 1.75e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3952 K03231 - oeu:111393660 156.762