Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3949 ATGGCCTCTTTCACCTGCTCTGCCTCCGACCTCCATGCTCTCCTCGGCAGCGGTGCAAACTCCACAGCCGCTGCCGAATACATCTGCAACGGCTTCAATGCCGTTGCAAACAAATTCACTGACACAACCTATGCCGTTGATAACACCTACCTTCTCTTCTCCGCTTACCTTGTTTTCGCCATGCAACTAGGTTTTGCAATGCTTTGCGCCGGTTCCGTTCGTGCCAAAAACACCATGAACATTATGTTAACCAATGTTCTTGATGCCGCCACTGGCGGCATCTTTTTCTATATTTTTGGTTTTGCCCTAGCTTTCGGCACACCTTCTGATGGTTTCATCGGAAAACACTTTTTCGGTCTCAGCGATTTTCCTTCGCAGTCATTTGATTATGGTTTTTTTCTCTTCCAGTGGGCTTTTGCAATTGCTGCTGCAGGAATCACTAGTGGTTCAATTGCTGAGAGAACACAATTTGTTTCTTATTTGATTTATTCGTCGTTTTTAACCGGTTTTGTTTATCCAATTGTTGCTCATTGGTTTTGGTCTGCTGACGGTTGGGGTAGTCCGGTTCGGTCTGAAAATCTTTTGTTTGGTTCTGGTGTTATTGATTTTGCTGGTTGTGGTGTTGTTCATTTAGTTGGTGCTGTTGCTGGTTTCTGGGGTGCTTTTATTGAAGGACCAAGAATTGGTAGATTTGATCATGAAGGTAAAAGTGTTTCATTGAGAGGACATAGTGGTACTTTAGTTGTTATGGGAACATTTTTACTTTGGTTTGGTTGGTACGGTTTTAACCCTGGTTCTTTTCTTAACATCTTGAAAACTTATGGTGAGAATGGTAATTACTATGGTCAATGGAGTGCTATTGGGAGGACAGCTGTCACAACTACATTGGCTGGATGCACTGCAGCATTGACTACTCTGTTTGGGAAACGTATGCAAACAGGTCATTGGAATGTTACTGATGTTTGTAACGGTTTGTTAGGTGGCTTTGCTGCTATAACTGCAGGGTGTTCTGTTGTGGATCCATGGGCTGCAATTATTTGTGGATTTGTTGCTGCTTGGGTTTTAATTGGATGCAATTTATTAGCTGAGAAATTTCACTATGATGATCCTCTTGAAGCTGCTCAACTTCATGGTGGTTGTGGTACTTGGGGGATTATTTTCACTGCTTTGTTTGCTAAGAAACAATATGTTAATGAGGTTTATGCCGGTTCGCCTGATAGGTCTTATGGTTTGTTTTTGGGAGGTGGAGGAAGATTGTTGGCTGCACATTTGGTTCAGATACTGGCTATTGTTGCTTGGGTGAGTGTTACTATGGGAACTTTGTTTTTTATTCTTCATAAATTGAATTTGCTTAGGAGTTCTGCTGAGGAAGAGATGGCTGGATTGGATTTAACTAGCCATGGTGGATTGGCTTATGAGTATCATGAAGAGCTTGAAGAACGTTCCAAGAAACGTGCAATTGAAGTATGA 1470 0.4218 MASFTCSASDLHALLGSGANSTAAAEYICNGFNAVANKFTDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYIFGFALAFGTPSDGFIGKHFFGLSDFPSQSFDYGFFLFQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGFVYPIVAHWFWSADGWGSPVRSENLLFGSGVIDFAGCGVVHLVGAVAGFWGAFIEGPRIGRFDHEGKSVSLRGHSGTLVVMGTFLLWFGWYGFNPGSFLNILKTYGENGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRMQTGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIICGFVAAWVLIGCNLLAEKFHYDDPLEAAQLHGGCGTWGIIFTALFAKKQYVNEVYAGSPDRSYGLFLGGGGRLLAAHLVQILAIVAWVSVTMGTLFFILHKLNLLRSSAEEEMAGLDLTSHGGLAYEYHEELEERSKKRAIEV* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3949 489 PANTHER AMMONIUM TRANSPORTER 1 488 - -
Mal3g3949 489 SUPERFAMILY Ammonium transporter 44 452 - -
Mal3g3949 489 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mal3g3949 489 Gene3D Ammonium transporter AmtB like domains 25 488 IPR029020 -
Mal3g3949 489 PANTHER AMMONIUM TRANSPORTER 1 488 - -
Mal3g3949 489 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mal3g3949 489 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3949 Mal-Chr3 117720350 117721819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3949 3 480 Inorganic Solute Cotransporters AT3G24290 75.105 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3949 K03320 - twl:120007420 803.897